RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 GRID1Q9ULK0 1009 aa17.66■□□□□ 0.42
PHGDH-229ENST00000641891 H0YHG0 523 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 CLDN5O00501 218 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 TGM2P21980 687 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 L1CAMP32004 1257 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 PHBP35232 272 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 PTPN9P43378 593 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 SCTRP47872 440 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 LILRA4P59901 499 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 LACTB2Q53H82 288 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-229ENST00000641891 TWF2Q6IBS0 349 aaKnown RBP17.65■□□□□ 0.42
PHGDH-229ENST00000641891 PPP1R21Q6ZMI0 780 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 FAM228AQ86W67 206 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 TBCBQ99426 244 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 PAFAH2Q99487 392 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 KDM4CQ9H3R0 1056 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 ABCF3Q9NUQ8 709 aa17.65■□□□□ 0.42
PHGDH-229ENST00000641891 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.64■□□□□ 0.42
PHGDH-229ENST00000641891 DCAF8L1A6NGE4 600 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 PTGESO14684 152 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 ZBED1O96006 694 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 TAC1P20366 129 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 RPA3P35244 121 aaPredicted RBP17.64■□□□□ 0.42
PHGDH-229ENST00000641891 GBE1Q04446 702 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 FSCN1Q16658 493 aaKnown RBP17.64■□□□□ 0.42
PHGDH-229ENST00000641891 SV2CQ496J9 727 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 LIMS2Q7Z4I7 341 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 RASAL3Q86YV0 1011 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 DENND1AQ8TEH3 1009 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 SMC6Q96SB8 1091 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 KCTD15Q96SI1 283 aaPredicted RBP17.64■□□□□ 0.42
PHGDH-229ENST00000641891 ZNF670Q9BS34 389 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 ACSS3Q9H6R3 686 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 NRDE2Q9H7Z3 1164 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 AP4E1Q9UPM8 1137 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 MFHAS1Q9Y4C4 1052 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 USP15Q9Y4E8 981 aaPredicted RBP17.64■□□□□ 0.42
PHGDH-229ENST00000641891 DNAH12Q6ZR08 3092 aa17.64■□□□□ 0.42
PHGDH-229ENST00000641891 PRPF4O43172 522 aaKnown RBP eCLIP17.64■□□□□ 0.413e-6■■■■□ 19.9
PHGDH-229ENST00000641891 HUS1O60921 280 aa17.64■□□□□ 0.41
PHGDH-229ENST00000641891 ASMTLO95671 621 aa17.64■□□□□ 0.41
PHGDH-229ENST00000641891 PNPLA4P41247 253 aa17.64■□□□□ 0.41
PHGDH-229ENST00000641891 RPL34P49207 117 aaKnown RBP17.64■□□□□ 0.41
PHGDH-229ENST00000641891 SNX16P57768 344 aa17.64■□□□□ 0.41
PHGDH-229ENST00000641891 PURAQ00577 322 aaKnown RBP17.64■□□□□ 0.41
PHGDH-229ENST00000641891 SLC10A2Q12908 348 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-229ENST00000641891 CNPY4Q8N129 248 aa17.64■□□□□ 0.41
PHGDH-229ENST00000641891 PYROXD2Q8N2H3 581 aa17.64■□□□□ 0.41
PHGDH-229ENST00000641891 B3GALNT2Q8NCR0 500 aa17.64■□□□□ 0.41
PHGDH-229ENST00000641891 CCDC110Q8TBZ0 833 aa17.64■□□□□ 0.41
PHGDH-229ENST00000641891 SPOCK2Q92563 424 aa17.64■□□□□ 0.41
PHGDH-229ENST00000641891 CENPIQ92674 756 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-229ENST00000641891 ACTR5Q9H9F9 607 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-229ENST00000641891 MTMR10Q9NXD2 777 aa17.64■□□□□ 0.41
PHGDH-229ENST00000641891 KBTBD13C9JR72 458 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 XPOTO43592 962 aaKnown RBP17.63■□□□□ 0.41
PHGDH-229ENST00000641891 BEST1O76090 585 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 DESP17661 470 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 ZNF157P51786 506 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-229ENST00000641891 RABGGTBP53611 331 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 SLC1A5Q15758 541 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 FAM47EQ6ZV65 393 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 DCAKDQ8WVC6 231 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 RTP4Q96DX8 246 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 SGSM3Q96HU1 749 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 DHRS4Q9BTZ2 278 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 PAK5Q9P286 719 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 PITX1P78337 314 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-229ENST00000641891 IL9RQ01113 521 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 ADIGQ0VDE8 80 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 DPYSL2Q16555 572 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 TRPM8Q7Z2W7 1104 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 SPATA21Q7Z572 469 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 PIGZQ86VD9 579 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 FUKQ8N0W3 1084 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 NR2E3Q9Y5X4 410 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 TEX264Q9Y6I9 313 aa17.63■□□□□ 0.41
PHGDH-229ENST00000641891 BCLAF3A2AJT9 711 aaKnown RBP17.62■□□□□ 0.41
PHGDH-229ENST00000641891 SMAPO00193 183 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 CHADO15335 359 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 TYROBPO43914 113 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 KRT4P19013 534 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 CA4P22748 312 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 HOXC8P31273 242 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 RGS2P41220 211 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 AFF1P51825 1210 aaKnown RBP17.62■□□□□ 0.41
PHGDH-229ENST00000641891 YWHAZP63104 245 aaKnown RBP17.62■□□□□ 0.41
PHGDH-229ENST00000641891 IRF5Q13568 498 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 RASA2Q15283 850 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 FAM133BQ5BKY9 247 aaKnown RBP17.62■□□□□ 0.41
PHGDH-229ENST00000641891 KIAA0319Q5VV43 1072 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 WSCD1Q658N2 575 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 ADGRD1Q6QNK2 874 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 C17orf99Q6UX52 265 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 FAM131BQ86XD5 332 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 MZB1Q8WU39 189 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 KLF6Q99612 283 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-229ENST00000641891 KATNAL1Q9BW62 490 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 TMPRSS4Q9NRS4 437 aa17.62■□□□□ 0.41
PHGDH-229ENST00000641891 ETNK2Q9NVF9 386 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms