RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 LCLAT1Q6UWP7 414 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 TRIM72Q6ZMU5 477 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 TOGARAM2Q6ZUX3 1019 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 FAM35AQ86V20 835 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 DCP1BQ8IZD4 617 aaKnown RBP9.91□□□□□ -0.82
PHGDH-228ENST00000641847 FUKQ8N0W3 1084 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 ACRBPQ8NEB7 543 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 PCED1BQ96HM7 432 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 PCDHB18PQ96TA0 734 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 DESI2Q9BSY9 194 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 B3GNT5Q9BYG0 378 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 LMAN1LQ9HAT1 526 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 HEBP1Q9NRV9 189 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 KRT82Q9NSB4 513 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 TMLHEQ9NVH6 421 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 GDE1Q9NZC3 331 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 HESX1Q9UBX0 185 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 ADAMTS1Q9UHI8 967 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 PCDHGC3Q9UN70 934 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 CEP83Q9Y592 693 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 CDY1Q9Y6F8 540 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 EPN1Q9Y6I3 576 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-228ENST00000641847 SMG1Q96Q15 3661 aaKnown RBP9.91□□□□□ -0.82
PHGDH-228ENST00000641847 PTPRDP23468 1912 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 LAMA5O15230 3695 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 BPTFQ12830 3046 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 C1QTNF9BB2RNN3 333 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 EIF3CLB5ME19 914 aaKnown RBP9.9□□□□□ -0.82
PHGDH-228ENST00000641847 CLDN5O00501 218 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 CCL16O15467 120 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 ADAM12O43184 909 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 KCNK5O95279 499 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 CYP1A1P04798 512 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-228ENST00000641847 C8AP07357 584 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 C1QTNF9P0C862 333 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 TDGF1P13385 188 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 CDR1P51861 262 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 NOMO3P69849 1222 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 ROR1Q01973 937 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 LRRC32Q14392 662 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 PABPC1LQ4VXU2 614 aaKnown RBP9.9□□□□□ -0.82
PHGDH-228ENST00000641847 HS1BP3Q53T59 392 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 STPG1Q5TH74 334 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 SLC8B1Q6J4K2 584 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 LILRA6Q6PI73 481 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 C1orf228Q6PIY5 440 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 C4orf50Q6ZRC1 276 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 LRRTM3Q86VH5 581 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 LONP2Q86WA8 852 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 TTC30AQ86WT1 665 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 SPATA2LQ8IUW3 424 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-228ENST00000641847 C1orf131Q8NDD1 294 aaKnown RBP9.9□□□□□ -0.82
PHGDH-228ENST00000641847 SLC30A5Q8TAD4 765 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 UBA3Q8TBC4 463 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 FAM3CQ92520 227 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 IRF7Q92985 503 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 PGLYRP2Q96PD5 576 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 EIF3CQ99613 913 aaKnown RBP9.9□□□□□ -0.82
PHGDH-228ENST00000641847 HNRNPABQ99729 332 aaKnown RBP9.9□□□□□ -0.82
PHGDH-228ENST00000641847 ZNF518BQ9C0D4 1074 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 BRD9Q9H8M2 597 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 ABI2Q9NYB9 513 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-228ENST00000641847 TAS2R14Q9NYV8 317 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 GTF3C4Q9UKN8 822 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 PYCARDQ9ULZ3 195 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 NENFQ9UMX5 172 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 LHX6Q9UPM6 363 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 MRPS23Q9Y3D9 190 aaKnown RBP9.9□□□□□ -0.82
PHGDH-228ENST00000641847 PATJQ8NI35 1801 aa9.9□□□□□ -0.82
PHGDH-228ENST00000641847 DOCK8Q8NF50 2099 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 ITPR1Q14643 2758 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 WDR27A2RRH5 827 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 MTMR11A4FU01 709 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 TMCO5BA8MYB1 307 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 ZNF263O14978 683 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 HRO43593 1189 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 AP1G2O75843 785 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 LCA5LO95447 670 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 ZNF806P0C7X5 589 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 FAM200BP0CF97 657 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 SETSIPP0DME0 302 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 UNGP13051 313 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-228ENST00000641847 OR1D2P34982 312 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 NSFP46459 744 aaKnown RBP9.89□□□□□ -0.83
PHGDH-228ENST00000641847 BCAT1P54687 386 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 NTHL1P78549 312 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 CENPCQ03188 943 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 BST2Q10589 180 aaKnown RBP9.89□□□□□ -0.83
PHGDH-228ENST00000641847 PDCLQ13371 301 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 FZD5Q13467 585 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 SPA17Q15506 151 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 NFE2Q16621 373 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-228ENST00000641847 CCDC122Q5T0U0 273 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 PSAPL1Q6NUJ1 521 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 ALKBH5Q6P6C2 394 aaKnown RBP9.89□□□□□ -0.83
PHGDH-228ENST00000641847 PAQR9Q6ZVX9 377 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 RTL10Q7L3V2 364 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 NPAS3Q8IXF0 933 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 SPEM1Q8N4L4 309 aa9.89□□□□□ -0.83
PHGDH-228ENST00000641847 FAM160A2Q8N612 972 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms