RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 STON1Q9Y6Q2 735 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 COL5A1P20908 1838 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-217ENST00000641455 MYLKQ15746 1914 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 KCNJ18B7U540 433 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 PRRT4C9JH25 899 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 ANKRD63C9JTQ0 380 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 F8VP50 259 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 H0Y8X5 98 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 CBX4O00257 560 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 GFRA2O00451 464 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 COCHO43405 550 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 PCDHGA12O60330 932 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 SYNCRIPO60506 623 aaKnown RBP8.34□□□□□ -1.07
PHGDH-217ENST00000641455 IL18RAPO95256 599 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 LDOC1O95751 146 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-217ENST00000641455 KRT18P05783 430 aaKnown RBP8.34□□□□□ -1.07
PHGDH-217ENST00000641455 PLA2G4BP0C869 781 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 KRT10P13645 584 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 TYRP14679 529 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 DGKGP49619 791 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 TPMTP51580 245 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 TMPRSS3P57727 454 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 SRSF1Q07955 248 aaKnown RBP eCLIP8.34□□□□□ -1.072e-10■■■□□ 18.2
PHGDH-217ENST00000641455 DNAJC3Q13217 504 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 DHX8Q14562 1220 aaKnown RBP8.34□□□□□ -1.07
PHGDH-217ENST00000641455 RTP5Q14D33 572 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 MAPRE1Q15691 268 aaKnown RBP8.34□□□□□ -1.07
PHGDH-217ENST00000641455 SLFN12LQ6IEE8 588 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 FAM171BQ6P995 826 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 TPGS1Q6ZTW0 290 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 HS2ST1Q7LGA3 356 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 GATAD2AQ86YP4 633 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 TMPRSS6Q8IU80 811 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 CSGALNACT2Q8N6G5 542 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 TOP6BLQ8N6T0 577 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 IGSF22Q8N9C0 903 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 SYT2Q8N9I0 419 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-217ENST00000641455 NOC3LQ8WTT2 800 aaKnown RBP8.34□□□□□ -1.07
PHGDH-217ENST00000641455 POMGNT1Q8WZA1 660 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 PRCCQ92733 491 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-217ENST00000641455 BHMTQ93088 406 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 GTF3C6Q969F1 213 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 IGSF8Q969P0 613 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 FBXO32Q969P5 355 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 WBP1Q96G27 269 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 CNDP2Q96KP4 475 aaKnown RBP8.34□□□□□ -1.07
PHGDH-217ENST00000641455 NUP58Q9BVL2 599 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 TTLL2Q9BWV7 592 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 MKRN2Q9H000 416 aaKnown RBP8.34□□□□□ -1.07
PHGDH-217ENST00000641455 CPNE5Q9HCH3 593 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 ITM2CQ9NQX7 267 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 PCDHGA1Q9Y5H4 931 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 HEMK1Q9Y5R4 338 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-217ENST00000641455 SLCO1B1Q9Y6L6 691 aa8.34□□□□□ -1.07
PHGDH-217ENST00000641455 PTPRJQ12913 1337 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 CACNG3O60359 315 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 TBCAO75347 108 aaKnown RBP8.33□□□□□ -1.08
PHGDH-217ENST00000641455 NTRK1P04629 796 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 PDGFRBP09619 1106 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 ABCB4P21439 1286 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 YWHAQP27348 245 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 GRIA4P48058 902 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 CSRP3P50461 194 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 SLC12A3P55017 1021 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 UCNP55089 124 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 C21orf59P57076 290 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 NOP14P78316 857 aaKnown RBP8.33□□□□□ -1.08
PHGDH-217ENST00000641455 PTPN13Q12923 2485 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 ANKRD1Q15327 319 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 TBC1D25Q3MII6 688 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 MDH1BQ5I0G3 518 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 HECTD3Q5T447 861 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 DTHD1Q6ZMT9 781 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 METTL3Q86U44 580 aaKnown RBP8.33□□□□□ -1.08
PHGDH-217ENST00000641455 GPBP1Q86WP2 473 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 NT5DC4Q86YG4 428 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 LRRC52Q8N7C0 313 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 C4orf32Q8N8J7 132 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 C1orf127Q8N9H9 656 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 PDZD8Q8NEN9 1154 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 CACTINQ8WUQ7 758 aaKnown RBP8.33□□□□□ -1.08
PHGDH-217ENST00000641455 C8orf76Q96K31 380 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 FAM84AQ96KN4 292 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 CEP295NLQ96MC4 621 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 REEP2Q9BRK0 252 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 PARVGQ9HBI0 331 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 TM9SF3Q9HD45 589 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 CRTAC1Q9NQ79 661 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 KCND2Q9NZV8 630 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 WDR35Q9P2L0 1181 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 NXF1Q9UBU9 619 aaKnown RBP8.33□□□□□ -1.08
PHGDH-217ENST00000641455 CDH9Q9ULB4 789 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 ODF2LQ9ULJ1 636 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 NUMA1Q14980 2115 aa8.33□□□□□ -1.08
PHGDH-217ENST00000641455 MYH10P35580 1976 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 GABRDO14764 452 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 TRAK2O60296 914 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 FSBPO95073 299 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 ITGAVP06756 1048 aa8.32□□□□□ -1.08
PHGDH-217ENST00000641455 C1SP09871 688 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms