RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 DAPK3O43293 454 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 HCRTO43612 131 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 CST8O60676 142 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 ZMYND10O75800 440 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 RTN3O95197 1032 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-215ENST00000641371 TIMP1P01033 207 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 GALTP07902 379 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 HSPA1AP0DMV8 641 aaKnown RBP10.13□□□□□ -0.79
PHGDH-215ENST00000641371 HSPA1BP0DMV9 641 aaKnown RBP10.13□□□□□ -0.79
PHGDH-215ENST00000641371 BDNFP23560 247 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 ACTN2P35609 894 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 EIF3BP55884 814 aaKnown RBP10.13□□□□□ -0.79
PHGDH-215ENST00000641371 RPL10AP62906 217 aaKnown RBP10.13□□□□□ -0.79
PHGDH-215ENST00000641371 ATP11AP98196 1134 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 DEUP1Q05D60 604 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 SCAPQ12770 1279 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 XRCC4Q13426 336 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 DPYSL3Q14195 570 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 CDO1Q16878 200 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 C15orf59Q2T9L4 293 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-215ENST00000641371 CTXN3Q4LDR2 81 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 PAN2Q504Q3 1202 aaKnown RBP10.13□□□□□ -0.79
PHGDH-215ENST00000641371 DCAF6Q58WW2 860 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 EFHC2Q5JST6 749 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 BRMS1LQ5PSV4 323 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 KAZNQ674X7 775 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 TTC27Q6P3X3 843 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 GSTA5Q7RTV2 222 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 CMTR2Q8IYT2 770 aaKnown RBP10.13□□□□□ -0.79
PHGDH-215ENST00000641371 DEFB106AQ8N104 65 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 ALLCQ8N6M5 410 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 ZMIZ2Q8NF64 920 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 OR10T2Q8NGX3 314 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 SLC35B2Q8TB61 432 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 C1orf54Q8WWF1 131 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 P3H4Q92791 437 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 CDK5RAP1Q96SZ6 601 aaKnown RBP10.13□□□□□ -0.79
PHGDH-215ENST00000641371 SNRNP25Q9BV90 132 aaKnown RBP10.13□□□□□ -0.79
PHGDH-215ENST00000641371 HEMGNQ9BXL5 484 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 CALN1Q9BXU9 219 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 PPP1R12CQ9BZL4 782 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 PCDH18Q9HCL0 1135 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 ABCC13Q9NSE7 274 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 HPCAL4Q9UM19 191 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 AP4E1Q9UPM8 1137 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 ZNF148Q9UQR1 794 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 ATP11BQ9Y2G3 1177 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 PRG3Q9Y2Y8 225 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-215ENST00000641371 NR2E1Q9Y466 385 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 BACE2Q9Y5Z0 518 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 COL4A4P53420 1690 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-215ENST00000641371 TCRBV7S2A1N4TA0A589 114 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 HACD1B0YJ81 288 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 PI4K2BG5E9Z4 385 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 PIK3R2O00459 728 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 GRAP2O75791 330 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 GABBR2O75899 941 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 LAG3P18627 525 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 PPM1AP35813 382 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 GRIK1P39086 918 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 HCAR3P49019 387 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 SLC11A1P49279 550 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 CCL23P55773 120 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 CREMQ03060 361 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 GPR17Q13304 367 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 NOMO1Q15155 1222 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 OASLQ15646 514 aaKnown RBP10.12□□□□□ -0.79
PHGDH-215ENST00000641371 SMTNL2Q2TAL5 461 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 USP41Q3LFD5 358 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 ATP13A4Q4VNC1 1196 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 FAM171A1Q5VUB5 890 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 SLC9A4Q6AI14 798 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 TRNP1Q6NT89 227 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 CYP4V2Q6ZWL3 525 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-215ENST00000641371 CDKL3Q8IVW4 592 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-215ENST00000641371 ZDHHC14Q8IZN3 488 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 CNPY4Q8N129 248 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 NUP93Q8N1F7 819 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 HASPINQ8TF76 798 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 RSAD2Q8WXG1 361 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 ART4Q93070 314 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 PIWIL1Q96J94 861 aaKnown RBP10.12□□□□□ -0.79
PHGDH-215ENST00000641371 SPATA17Q96L03 361 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 TRIM51Q9BSJ1 452 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 TTPALQ9BTX7 342 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 FRMD8Q9BZ67 464 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-215ENST00000641371 BRD8Q9H0E9 1235 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 AAASQ9NRG9 546 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 CHST7Q9NS84 486 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 OLA1Q9NTK5 396 aaKnown RBP10.12□□□□□ -0.79
PHGDH-215ENST00000641371 CACNG4Q9UBN1 327 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 SCML2Q9UQR0 700 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 SSX2IPQ9Y2D8 614 aa10.12□□□□□ -0.79
PHGDH-215ENST00000641371 HTTP42858 3142 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 VWA8A3KMH1 1905 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 PLXNA3P51805 1871 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.11□□□□□ -0.79
PHGDH-215ENST00000641371 ESYT3A0FGR9 886 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 GOLGA6L10A6NI86 522 aa10.11□□□□□ -0.79
PHGDH-215ENST00000641371 GOLGA8KD6RF30 607 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms