RNA–Protein interactions for RNA: ENST00000640507.1

SPIN3-240, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-240ENST00000640507 SPHK2Q9NRA0 654 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 NUDT5Q9UKK9 219 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 SLC8A2Q9UPR5 921 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 FANCMQ8IYD8 2048 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 A0A0A0MRY4 1105 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 CCDC163A0A0D9SF12 145 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 TULP2O00295 520 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 IRF1P10914 325 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 SLC6A11P48066 632 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 TKTL1P51854 596 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 CNGA2Q16280 664 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 PKDCCQ504Y2 493 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 LCLAT1Q6UWP7 414 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 SYT13Q7L8C5 426 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 ARHGEF19Q8IW93 802 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 CAMKK1Q8N5S9 505 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 RPLP0P6Q8NHW5 317 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 KCTD13Q8WZ19 329 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 LRRC4Q9HBW1 653 aa16.62■□□□□ 0.25
SPIN3-240ENST00000640507 LSM7Q9UK45 103 aaKnown RBP16.62■□□□□ 0.25
SPIN3-240ENST00000640507 VPS13AQ96RL7 3174 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 HELZP42694 1942 aaKnown RBP16.61■□□□□ 0.25
SPIN3-240ENST00000640507 MDM4O15151 490 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 HOXC11O43248 304 aaPredicted RBP16.61■□□□□ 0.25
SPIN3-240ENST00000640507 HRO43593 1189 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 ZBED1O96006 694 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 SETSIPP0DME0 302 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 HOXC13P31276 330 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 COG7P83436 770 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 STILQ15468 1287 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 HEATR6Q6AI08 1181 aaKnown RBP16.61■□□□□ 0.25
SPIN3-240ENST00000640507 WDR5BQ86VZ2 330 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 TMEM25Q86YD3 366 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 IRF2BP1Q8IU81 584 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 CREBRFQ8IUR6 639 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 UBA3Q8TBC4 463 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 TFAP2BQ92481 460 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 ACDQ96AP0 544 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
SPIN3-240ENST00000640507 LMBRD1Q9NUN5 540 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 SMG5Q9UPR3 1016 aaKnown RBP16.61■□□□□ 0.25
SPIN3-240ENST00000640507 CNTN6Q9UQ52 1028 aa16.61■□□□□ 0.25
SPIN3-240ENST00000640507 PTPRZ1P23471 2315 aaPredicted RBP16.6■□□□□ 0.25
SPIN3-240ENST00000640507 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.6■□□□□ 0.25
SPIN3-240ENST00000640507 YWHAGP61981 247 aaKnown RBP eCLIP16.6■□□□□ 0.25
SPIN3-240ENST00000640507 BTBD8Q5XKL5 378 aa16.6■□□□□ 0.25
SPIN3-240ENST00000640507 C12orf40Q86WS4 652 aa16.6■□□□□ 0.25
SPIN3-240ENST00000640507 ETFBKMTQ8IXQ9 262 aa16.6■□□□□ 0.25
SPIN3-240ENST00000640507 DCLK2Q8N568 766 aa16.6■□□□□ 0.25
SPIN3-240ENST00000640507 RBBP8NLQ8NC74 664 aaPredicted RBP16.6■□□□□ 0.25
SPIN3-240ENST00000640507 USP33Q8TEY7 942 aa16.6■□□□□ 0.25
SPIN3-240ENST00000640507 SLC35F5Q8WV83 523 aa16.6■□□□□ 0.25
SPIN3-240ENST00000640507 KREMEN1Q96MU8 473 aa16.6■□□□□ 0.25
SPIN3-240ENST00000640507 HINFPQ9BQA5 517 aa16.6■□□□□ 0.25
SPIN3-240ENST00000640507 ZSWIM1Q9BR11 485 aa16.6■□□□□ 0.25
SPIN3-240ENST00000640507 ULBP1Q9BZM6 244 aa16.6■□□□□ 0.25
SPIN3-240ENST00000640507 INTS2Q9H0H0 1204 aaKnown RBP16.6■□□□□ 0.25
SPIN3-240ENST00000640507 NUP62CLQ9H1M0 184 aa16.6■□□□□ 0.25
SPIN3-240ENST00000640507 RIF1Q5UIP0 2472 aaKnown RBP16.59■□□□□ 0.25
SPIN3-240ENST00000640507 STC2O76061 302 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 KAT7O95251 611 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 APODP05090 189 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 GRIA2P42262 883 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 ZNF132P52740 706 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 MRPS21P82921 87 aaKnown RBP16.59■□□□□ 0.25
SPIN3-240ENST00000640507 MESP2Q0VG99 397 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 SIM2Q14190 667 aaPredicted RBP16.59■□□□□ 0.25
SPIN3-240ENST00000640507 DMC1Q14565 340 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 ANO4Q32M45 955 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 PREPLQ4J6C6 727 aaPredicted RBP16.59■□□□□ 0.25
SPIN3-240ENST00000640507 Q6ZNB5 142 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 BHLHA9Q7RTU4 235 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 MIB1Q86YT6 1006 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 SCML4Q8N228 414 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 SECISBP2LQ93073 1101 aaKnown RBP16.59■□□□□ 0.25
SPIN3-240ENST00000640507 IPO9Q96P70 1041 aaKnown RBP16.59■□□□□ 0.25
SPIN3-240ENST00000640507 UBE2TQ9NPD8 197 aaPredicted RBP16.59■□□□□ 0.25
SPIN3-240ENST00000640507 ARHGEF4Q9NR80 690 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 POLR3BQ9NW08 1133 aaPredicted RBP16.59■□□□□ 0.25
SPIN3-240ENST00000640507 NCDNQ9UBB6 729 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 RAB23Q9ULC3 237 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.59■□□□□ 0.25
SPIN3-240ENST00000640507 ZNF510Q9Y2H8 683 aa16.59■□□□□ 0.25
SPIN3-240ENST00000640507 MYH10P35580 1976 aa16.58■□□□□ 0.25
SPIN3-240ENST00000640507 TULP3O75386 442 aa16.58■□□□□ 0.24
SPIN3-240ENST00000640507 ERCC5P28715 1186 aaPredicted RBP16.58■□□□□ 0.24
SPIN3-240ENST00000640507 TNFRSF4P43489 277 aa16.58■□□□□ 0.24
SPIN3-240ENST00000640507 ADIGQ0VDE8 80 aa16.58■□□□□ 0.24
SPIN3-240ENST00000640507 EFEMP1Q12805 493 aa16.58■□□□□ 0.24
SPIN3-240ENST00000640507 TPD52L1Q16890 204 aaPredicted RBP16.58■□□□□ 0.24
SPIN3-240ENST00000640507 C2orf27AQ580R0 203 aa16.58■□□□□ 0.24
SPIN3-240ENST00000640507 ENOSF1Q7L5Y1 443 aa16.58■□□□□ 0.24
SPIN3-240ENST00000640507 PHTF2Q8N3S3 785 aa16.58■□□□□ 0.24
SPIN3-240ENST00000640507 NAT16Q8N8M0 369 aa16.58■□□□□ 0.24
SPIN3-240ENST00000640507 NDRG1Q92597 394 aaKnown RBP16.58■□□□□ 0.24
SPIN3-240ENST00000640507 FAM81BQ96LP2 452 aa16.58■□□□□ 0.24
SPIN3-240ENST00000640507 DCLK3Q9C098 648 aa16.58■□□□□ 0.24
SPIN3-240ENST00000640507 THAP9Q9H5L6 903 aa16.58■□□□□ 0.24
SPIN3-240ENST00000640507 CNGB3Q9NQW8 809 aa16.58■□□□□ 0.24
SPIN3-240ENST00000640507 MARK1Q9P0L2 795 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms