RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 KLC2Q9H0B6 622 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 PDGFCQ9NRA1 345 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 SEPT10Q9P0V9 454 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 ZFATQ9P243 1243 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 STOML1Q9UBI4 398 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 TEX264Q9Y6I9 313 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 NDC80O14777 642 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 HCRTO43612 131 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 SNRPAP09012 282 aaKnown RBP15.16■□□□□ 0.02
SCARB2-221ENST00000640341 CSH1P0DML2 217 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 CSH2P0DML3 217 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 AMPD1P23109 780 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 PHKA2P46019 1235 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 SESN2P58004 480 aaPredicted RBP15.16■□□□□ 0.02
SCARB2-221ENST00000640341 TFDP2Q14188 446 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 NOMO1Q15155 1222 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 GLRA4Q5JXX5 417 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 MAP7D3Q8IWC1 876 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 TEX9Q8N6V9 391 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 PLD5Q8N7P1 536 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 DNERQ8NFT8 737 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 DEPDC1BQ8WUY9 529 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 SCG3Q8WXD2 468 aaKnown RBP15.16■□□□□ 0.02
SCARB2-221ENST00000640341 PPCSQ9HAB8 311 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 SMYD2Q9NRG4 433 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 MTO1Q9Y2Z2 717 aaKnown RBP15.16■□□□□ 0.02
SCARB2-221ENST00000640341 SNX9Q9Y5X1 595 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 APOL1O14791 398 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 PTPN7P35236 360 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 GBE1Q04446 702 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 PRKD1Q15139 912 aaPredicted RBP15.15■□□□□ 0.02
SCARB2-221ENST00000640341 SURF1Q15526 300 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 TTC39BQ5VTQ0 682 aaPredicted RBP15.15■□□□□ 0.02
SCARB2-221ENST00000640341 SMC1BQ8NDV3 1235 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 AGR3Q8TD06 166 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 OTUD5Q96G74 571 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 RNF157Q96PX1 679 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 RNPEPQ9H4A4 650 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 WDR35Q9P2L0 1181 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 ARHGAP42A6NI28 874 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 E7ESA3 106 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 TBX10O75333 385 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 LYPLA1O75608 230 aaPredicted RBP15.15■□□□□ 0.02
SCARB2-221ENST00000640341 SDC4P31431 198 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 CDH5P33151 784 aaPredicted RBP15.15■□□□□ 0.02
SCARB2-221ENST00000640341 ZNF143P52747 638 aaPredicted RBP15.15■□□□□ 0.02
SCARB2-221ENST00000640341 BLMHQ13867 455 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 UBAP2LQ14157 1087 aaKnown RBP15.15■□□□□ 0.02
SCARB2-221ENST00000640341 CCDC142Q17RM4 750 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 GOLGA7BQ2TAP0 167 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 WASHC2DQ5SRD0 308 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 ZNF772Q68DY9 489 aaPredicted RBP15.15■□□□□ 0.02
SCARB2-221ENST00000640341 POU5F2Q8N7G0 328 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 CNPY3Q9BT09 278 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 SAR1AQ9NR31 198 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 SPDYE5A6NIY4 337 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 WFS1O76024 890 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 ETV4P43268 484 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 CES3Q6UWW8 571 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 TREML1Q86YW5 311 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 CCDC124Q96CT7 223 aaKnown RBP15.15■□□□□ 0.02
SCARB2-221ENST00000640341 EBF4Q9BQW3 602 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 LHX5Q9H2C1 402 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 ADAMTS5Q9UNA0 930 aa15.15■□□□□ 0.02
SCARB2-221ENST00000640341 MYO18AQ92614 2054 aaKnown RBP15.15■□□□□ 0.02
SCARB2-221ENST00000640341 ABLIM1O14639 778 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 CILPO75339 1184 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 METTL18O95568 372 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 TXNP10599 105 aaKnown RBP15.14■□□□□ 0.01
SCARB2-221ENST00000640341 KCNA4P22459 653 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 ZNF280AP59817 542 aaPredicted RBP15.14■□□□□ 0.01
SCARB2-221ENST00000640341 PMF1Q6P1K2 205 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 DENND5BQ6ZUT9 1274 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 CLEC4CQ8WTT0 213 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 NLRP7Q8WX94 980 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 GPR20Q99678 358 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 DDX50Q9BQ39 737 aaKnown RBP15.14■□□□□ 0.01
SCARB2-221ENST00000640341 DHRS4Q9BTZ2 278 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 SNRNP25Q9BV90 132 aaKnown RBP15.14■□□□□ 0.01
SCARB2-221ENST00000640341 SPATC1LQ9H0A9 340 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 ETNK2Q9NVF9 386 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 PAK5Q9P286 719 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 IGKV6D-21A0A0A0MT36 114 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.14■□□□□ 0.01
SCARB2-221ENST00000640341 PDGFRBP09619 1106 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 ICAM3P32942 547 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 KCNJ11Q14654 390 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 RSPH3Q86UC2 560 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 SESTD1Q86VW0 696 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 CHST13Q8NET6 341 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 PCDH19Q8TAB3 1148 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 KIF12Q96FN5 646 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 C20orf27Q9GZN8 174 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 CYP4F11Q9HBI6 524 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 MFHAS1Q9Y4C4 1052 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 B4GALT4O60513 344 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 SMIM24O75264 130 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 LCP1P13796 627 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 CYP3A5P20815 502 aa15.14■□□□□ 0.01
SCARB2-221ENST00000640341 ADORA2BP29275 332 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms