RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 SPC24Q8NBT2 197 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 TTC16Q8NEE8 873 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 RIN3Q8TB24 985 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 IRGQQ8WZA9 623 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 FAM149B1Q96BN6 582 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 C18orf8Q96DM3 657 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 LRRC3BQ96PB8 259 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 UHRF1Q96T88 793 aaPredicted RBP13.84□□□□□ -0.19
GTF3A-209ENST00000640289 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.84□□□□□ -0.19
GTF3A-209ENST00000640289 TRPV4Q9HBA0 871 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 ZFP14Q9HCL3 533 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 SMPD4Q9NXE4 827 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 CLIC5Q9NZA1 410 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 ZMYM5Q9UJ78 669 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 CPQQ9Y646 472 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 HEPACAM2A8MVW5 462 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 DPYSL4O14531 572 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 GRAP2O75791 330 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 FYNP06241 537 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 MMP8P22894 467 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 WEE1P30291 646 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 ATP5C1P36542 298 aaKnown RBP13.83□□□□□ -0.2
GTF3A-209ENST00000640289 EIF4A3P38919 411 aaKnown RBP13.83□□□□□ -0.2
GTF3A-209ENST00000640289 SLC7A9P82251 487 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 SLC6A3Q01959 620 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 EFEMP1Q12805 493 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 PTP4A2Q12974 167 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 GRM2Q14416 872 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 C10orf120Q5SQS8 335 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 ACAD10Q6JQN1 1059 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 VITQ6UXI7 678 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 MTSS1LQ765P7 747 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 RNF135Q8IUD6 432 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 CHP1Q99653 195 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 NACA2Q9H009 215 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 ABCC13Q9NSE7 274 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 TDP1Q9NUW8 608 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 ADAMTS1Q9UHI8 967 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 RASAL2Q9UJF2 1139 aa13.83□□□□□ -0.2
GTF3A-209ENST00000640289 BZW2Q9Y6E2 419 aaKnown RBP13.83□□□□□ -0.2
GTF3A-209ENST00000640289 TCF20Q9UGU0 1960 aaKnown RBP13.83□□□□□ -0.2
GTF3A-209ENST00000640289 OBSL1O75147 1896 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 MYH10P35580 1976 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 GOLGA8SH3BPF8 625 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 SART1O43290 800 aaKnown RBP13.82□□□□□ -0.2
GTF3A-209ENST00000640289 ECI2O75521 394 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 GJB6O95452 261 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 NCAM1P13591 858 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 PFKLP17858 780 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 SNX16P57768 344 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 TSR1Q2NL82 804 aaKnown RBP13.82□□□□□ -0.2
GTF3A-209ENST00000640289 FAM102AQ5T9C2 384 aaPredicted RBP13.82□□□□□ -0.2
GTF3A-209ENST00000640289 SYPL2Q5VXT5 272 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 MON1BQ7L1V2 547 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 RSRC2Q7L4I2 434 aaKnown RBP13.82□□□□□ -0.2
GTF3A-209ENST00000640289 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.82□□□□□ -0.2
GTF3A-209ENST00000640289 PHF13Q86YI8 300 aaPredicted RBP13.82□□□□□ -0.2
GTF3A-209ENST00000640289 MIB1Q86YT6 1006 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 CELF5Q8N6W0 485 aaKnown RBP13.82□□□□□ -0.2
GTF3A-209ENST00000640289 MSANTD4Q8NCY6 345 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 SH3RF2Q8TEC5 729 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 GOLGA1Q92805 767 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 KHSRPQ92945 711 aaKnown RBP eCLIP13.82□□□□□ -0.29e-6■□□□□ 10.6
GTF3A-209ENST00000640289 WBP2Q969T9 261 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 ELSPBP1Q96BH3 223 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 ZFRQ96KR1 1074 aaKnown RBP13.82□□□□□ -0.2
GTF3A-209ENST00000640289 SMOC2Q9H3U7 446 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 POPDC2Q9HBU9 364 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 GKN1Q9NS71 199 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 ZNHIT6Q9NWK9 470 aaKnown RBP13.82□□□□□ -0.2
GTF3A-209ENST00000640289 ADAM22Q9P0K1 906 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 IGSF9Q9P2J2 1179 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 SFMBT1Q9UHJ3 866 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 ARHGAP26Q9UNA1 814 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 NAALADL1Q9UQQ1 740 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 MYO16Q9Y6X6 1858 aa13.82□□□□□ -0.2
GTF3A-209ENST00000640289 A0A087X0T9 212 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 LEFTY2O00292 366 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 SCAMP3O14828 347 aaKnown RBP13.81□□□□□ -0.2
GTF3A-209ENST00000640289 NARSO43776 548 aaKnown RBP13.81□□□□□ -0.2
GTF3A-209ENST00000640289 FAM228BP0C875 321 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 IRF1P10914 325 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 RNASE9P60153 205 aaKnown RBP13.81□□□□□ -0.2
GTF3A-209ENST00000640289 YWHAZP63104 245 aaKnown RBP13.81□□□□□ -0.2
GTF3A-209ENST00000640289 USP4Q13107 963 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 ZNF268Q14587 947 aaPredicted RBP13.81□□□□□ -0.2
GTF3A-209ENST00000640289 ZNF77Q15935 545 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 EFHC1Q5JVL4 640 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 KLHDC10Q6PID8 442 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 TOGARAM2Q6ZUX3 1019 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 SLC26A9Q7LBE3 791 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 TADA2BQ86TJ2 420 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 ZDHHC17Q8IUH5 632 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 MFSD6LQ8IWD5 586 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 MCOLN2Q8IZK6 566 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 DEFB106AQ8N104 65 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 SLC44A3Q8N4M1 653 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 ZNF276Q8N554 614 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 BPIFB1Q8TDL5 484 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 RNF139Q8WU17 664 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms