RNA–Protein interactions for RNA: ENST00000640154.1

CGREF1-209, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 5 BASIC

Gene CGREF1, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-209ENST00000640154 CNTN6Q9UQ52 1028 aa12.77□□□□□ -0.37
CGREF1-209ENST00000640154 SH3BP1Q9Y3L3 701 aa12.77□□□□□ -0.37
CGREF1-209ENST00000640154 PCDHB4Q9Y5E5 795 aa12.77□□□□□ -0.37
CGREF1-209ENST00000640154 EML5Q05BV3 1969 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 GTPBP10A4D1E9 387 aaKnown RBP12.76□□□□□ -0.37
CGREF1-209ENST00000640154 RNF225M0QZC1 329 aaPredicted RBP12.76□□□□□ -0.37
CGREF1-209ENST00000640154 TULP2O00295 520 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 SCAMP3O14828 347 aaKnown RBP12.76□□□□□ -0.37
CGREF1-209ENST00000640154 ATG13O75143 517 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 RNF40O75150 1001 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 ADH1CP00326 375 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 ERCC5P28715 1186 aaPredicted RBP12.76□□□□□ -0.37
CGREF1-209ENST00000640154 EIF2DP41214 584 aaKnown RBP12.76□□□□□ -0.37
CGREF1-209ENST00000640154 PLA2G4AP47712 749 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 STILQ15468 1287 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 CNGA2Q16280 664 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 DPCR1Q3MIW9 517 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 CT47A1Q5JQC4 288 aaPredicted RBP12.76□□□□□ -0.37
CGREF1-209ENST00000640154 C10orf120Q5SQS8 335 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 SMYD5Q6GMV2 418 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 PKN3Q6P5Z2 889 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 RRAGAQ7L523 313 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 TADA2BQ86TJ2 420 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 ARHGAP18Q8N392 663 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 SUMF1Q8NBK3 374 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 TFAP2BQ92481 460 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 GBP4Q96PP9 640 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 CDK5RAP1Q96SZ6 601 aaKnown RBP12.76□□□□□ -0.37
CGREF1-209ENST00000640154 THAP9Q9H5L6 903 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 DNMT3LQ9UJW3 386 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 DCHS1Q96JQ0 3298 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 RALGAPA1Q6GYQ0 2036 aa12.76□□□□□ -0.37
CGREF1-209ENST00000640154 HOXC11O43248 304 aaPredicted RBP12.75□□□□□ -0.37
CGREF1-209ENST00000640154 ZBED1O96006 694 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 RALAP11233 206 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 ADH5P11766 374 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 TKTL1P51854 596 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 GOLGA8FQ08AF8 430 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 GOLGA8DPQ0D2H9 430 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 GON4LQ3T8J9 2241 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 LY6G5CQ5SRR4 150 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 ENOSF1Q7L5Y1 443 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 BHLHA9Q7RTU4 235 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 BBS7Q8IWZ6 715 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 SCML4Q8N228 414 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 RBBP8NLQ8NC74 664 aaPredicted RBP12.75□□□□□ -0.37
CGREF1-209ENST00000640154 CCDC26Q8TAB7 109 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 KCTD13Q8WZ19 329 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 ZSWIM1Q9BR11 485 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 ULBP1Q9BZM6 244 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 EPC1Q9H2F5 836 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 DACH1Q9UI36 760 aa12.75□□□□□ -0.37
CGREF1-209ENST00000640154 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.75□□□□□ -0.37
CGREF1-209ENST00000640154 A0A0A0MRY4 1105 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 MDM4O15151 490 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 IRF1P10914 325 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 MTIF2P46199 727 aaKnown RBP12.74□□□□□ -0.37
CGREF1-209ENST00000640154 YWHAGP61981 247 aaKnown RBP eCLIP12.74□□□□□ -0.37
CGREF1-209ENST00000640154 GAD2Q05329 585 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 MEA1Q16626 185 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 TPD52L1Q16890 204 aaPredicted RBP12.74□□□□□ -0.37
CGREF1-209ENST00000640154 TRIM65Q6PJ69 517 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 GBP6Q6ZN66 633 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 Q6ZNB5 142 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 RBM43Q6ZSC3 357 aaKnown RBP12.74□□□□□ -0.37
CGREF1-209ENST00000640154 FAM114A1Q8IWE2 563 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 ETFBKMTQ8IXQ9 262 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 GPT2Q8TD30 523 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 SLC35F5Q8WV83 523 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 FAM81BQ96LP2 452 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 IPO9Q96P70 1041 aaKnown RBP12.74□□□□□ -0.37
CGREF1-209ENST00000640154 CRACR2AQ9BSW2 395 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 LRRC4Q9HBW1 653 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 UBE2TQ9NPD8 197 aaPredicted RBP12.74□□□□□ -0.37
CGREF1-209ENST00000640154 SPHK2Q9NRA0 654 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 LSM7Q9UK45 103 aaKnown RBP12.74□□□□□ -0.37
CGREF1-209ENST00000640154 NUDT5Q9UKK9 219 aa12.74□□□□□ -0.37
CGREF1-209ENST00000640154 CACNA1AO00555 2505 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 ABCA7Q8IZY2 2146 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 CCDC163A0A0D9SF12 145 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.73□□□□□ -0.37
CGREF1-209ENST00000640154 K7EQS6 105 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 GABBR2O75899 941 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 STC2O76061 302 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
CGREF1-209ENST00000640154 SLC9A1P19634 815 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 BRD2P25440 801 aaKnown RBP12.73□□□□□ -0.37
CGREF1-209ENST00000640154 SLC6A11P48066 632 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 FNTBP49356 437 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 MFAP3P55082 362 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 COG7P83436 770 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 DMWDQ09019 674 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 ADIGQ0VDE8 80 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 MESP2Q0VG99 397 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 MAN2A1Q16706 1144 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 EXOC3L4Q17RC7 722 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 PMF1Q6P1K2 205 aa12.73□□□□□ -0.37
CGREF1-209ENST00000640154 SYT13Q7L8C5 426 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms