RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 RRAGBQ5VZM2 374 aa5.77□□□□□ -1.49
CCDC7-216ENST00000640058 LINC01465Q8N7H1 131 aa5.77□□□□□ -1.49
CCDC7-216ENST00000640058 NANOGP1Q8N7R0 232 aa5.77□□□□□ -1.49
CCDC7-216ENST00000640058 ZBTB9Q96C00 473 aa5.77□□□□□ -1.49
CCDC7-216ENST00000640058 ZC3H10Q96K80 434 aaKnown RBP5.77□□□□□ -1.49
CCDC7-216ENST00000640058 USP29Q9HBJ7 922 aa5.77□□□□□ -1.49
CCDC7-216ENST00000640058 PRDM11Q9NQV5 511 aa5.77□□□□□ -1.49
CCDC7-216ENST00000640058 DNAJB11Q9UBS4 358 aa5.77□□□□□ -1.49
CCDC7-216ENST00000640058 NKX1-2Q9UD57 310 aaPredicted RBP5.77□□□□□ -1.49
CCDC7-216ENST00000640058 HPSEQ9Y251 543 aa5.77□□□□□ -1.49
CCDC7-216ENST00000640058 CA12O43570 354 aa5.76□□□□□ -1.49
CCDC7-216ENST00000640058 SNX2O60749 519 aa5.76□□□□□ -1.49
CCDC7-216ENST00000640058 INMTO95050 263 aa5.76□□□□□ -1.49
CCDC7-216ENST00000640058 CD19P15391 556 aa5.76□□□□□ -1.49
CCDC7-216ENST00000640058 GHRHRQ02643 423 aa5.76□□□□□ -1.49
CCDC7-216ENST00000640058 MFSD13AQ14CX5 517 aa5.76□□□□□ -1.49
CCDC7-216ENST00000640058 MANEALQ5VSG8 457 aa5.76□□□□□ -1.49
CCDC7-216ENST00000640058 Q8N9P0 234 aaPredicted RBP5.76□□□□□ -1.49
CCDC7-216ENST00000640058 IPCEF1Q8WWN9 437 aaPredicted RBP5.76□□□□□ -1.49
CCDC7-216ENST00000640058 ZNF668Q96K58 619 aaPredicted RBP5.76□□□□□ -1.49
CCDC7-216ENST00000640058 FAM83DQ9H4H8 585 aa5.76□□□□□ -1.49
CCDC7-216ENST00000640058 TRIM36Q9NQ86 728 aa5.76□□□□□ -1.49
CCDC7-216ENST00000640058 STEAP1Q9UHE8 339 aa5.76□□□□□ -1.49
CCDC7-216ENST00000640058 SLC27A6Q9Y2P4 619 aa5.76□□□□□ -1.49
CCDC7-216ENST00000640058 CLIC1O00299 241 aa5.75□□□□□ -1.49
CCDC7-216ENST00000640058 CYP19A1P11511 503 aaPredicted RBP5.75□□□□□ -1.49
CCDC7-216ENST00000640058 HOXD9P28356 352 aaPredicted RBP5.75□□□□□ -1.49
CCDC7-216ENST00000640058 EIF4A1P60842 406 aaKnown RBP5.75□□□□□ -1.49
CCDC7-216ENST00000640058 SLC14A1Q13336 389 aa5.75□□□□□ -1.49
CCDC7-216ENST00000640058 MEX3CQ5U5Q3 659 aaKnown RBP5.75□□□□□ -1.49
CCDC7-216ENST00000640058 SHC4Q6S5L8 630 aa5.75□□□□□ -1.49
CCDC7-216ENST00000640058 RANBP10Q6VN20 620 aa5.75□□□□□ -1.49
CCDC7-216ENST00000640058 FSTL5Q8N475 847 aaPredicted RBP5.75□□□□□ -1.49
CCDC7-216ENST00000640058 NGDNQ8NEJ9 315 aaKnown RBP5.75□□□□□ -1.49
CCDC7-216ENST00000640058 MAP4K1Q92918 833 aa5.75□□□□□ -1.49
CCDC7-216ENST00000640058 CUL5Q93034 780 aa5.75□□□□□ -1.49
CCDC7-216ENST00000640058 MSLNLQ96KJ4 702 aa5.75□□□□□ -1.49
CCDC7-216ENST00000640058 VPS51Q9UID3 782 aa5.75□□□□□ -1.49
CCDC7-216ENST00000640058 FYB1O15117 783 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 PQBP1O60828 265 aaKnown RBP5.74□□□□□ -1.49
CCDC7-216ENST00000640058 ATF7P17544 494 aaPredicted RBP5.74□□□□□ -1.49
CCDC7-216ENST00000640058 ADRA1DP25100 572 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 RBL1P28749 1068 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 TXNL4AP83876 142 aaKnown RBP5.74□□□□□ -1.49
CCDC7-216ENST00000640058 CFHR3Q02985 330 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 ZNF91Q05481 1191 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 ST3GAL2Q16842 350 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 C4orf46Q504U0 113 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 TMTC4Q5T4D3 741 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 CYB5RLQ6IPT4 315 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 VSTM1Q6UX27 236 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 RNF44Q7L0R7 432 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 FMNL3Q8IVF7 1028 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 P3H2Q8IVL5 708 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 C16orf71Q8IYS4 520 aaPredicted RBP5.74□□□□□ -1.49
CCDC7-216ENST00000640058 C12orf76Q8N812 135 aaPredicted RBP5.74□□□□□ -1.49
CCDC7-216ENST00000640058 EDC3Q96F86 508 aaKnown RBP5.74□□□□□ -1.49
CCDC7-216ENST00000640058 VPS50Q96JG6 964 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 BTBD1Q9H0C5 482 aa5.74□□□□□ -1.49
CCDC7-216ENST00000640058 A8MVJ9 347 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 H3BNC9 293 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 PRAMEF2O60811 474 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 ANXA2P07355 339 aaKnown RBP5.73□□□□□ -1.49
CCDC7-216ENST00000640058 NR4A2P43354 598 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 PLCD1P51178 756 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 HTRA4P83105 476 aaPredicted RBP5.73□□□□□ -1.49
CCDC7-216ENST00000640058 KLHDC7AQ5VTJ3 777 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 LIX1LQ8IVB5 337 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 PNPLA1Q8N8W4 532 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 ZNF398Q8TD17 642 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 BRIP1Q9BX63 1249 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 NUP62CLQ9H1M0 184 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 PNPLA8Q9NP80 782 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 MTMR4Q9NYA4 1195 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 AFG3L2Q9Y4W6 797 aa5.73□□□□□ -1.49
CCDC7-216ENST00000640058 RHPN2P1A8MT19 583 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 TMEM225BP0DP42 221 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 HTR7P34969 479 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 COPAP53621 1224 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 YPEL5P62699 121 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 GPC5P78333 572 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 KPNB1Q14974 876 aaKnown RBP5.72□□□□□ -1.49
CCDC7-216ENST00000640058 GRHL2Q6ISB3 625 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 MZT2AQ6P582 158 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 SDR16C5Q8N3Y7 309 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 NRACQ8N912 160 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 PHKBQ93100 1093 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 IQCDQ96DY2 449 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 LRRC46Q96FV0 321 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 PRR11Q96HE9 360 aaPredicted RBP5.72□□□□□ -1.49
CCDC7-216ENST00000640058 STRBPQ96SI9 672 aaKnown RBP5.72□□□□□ -1.49
CCDC7-216ENST00000640058 SELENOOQ9BVL4 669 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 SLC25A32Q9H2D1 315 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 HEYLQ9NQ87 328 aaPredicted RBP5.72□□□□□ -1.49
CCDC7-216ENST00000640058 TMEM184CQ9NVA4 438 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 FAM50BQ9Y247 325 aa5.72□□□□□ -1.49
CCDC7-216ENST00000640058 KPNA5O15131 536 aa5.71□□□□□ -1.5
CCDC7-216ENST00000640058 CCT4P50991 539 aaKnown RBP5.71□□□□□ -1.5
CCDC7-216ENST00000640058 DAG1Q14118 895 aa5.71□□□□□ -1.5
CCDC7-216ENST00000640058 RBMS2Q15434 407 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms