RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 EIF3EP60228 445 aaKnown RBP15.73■□□□□ 0.11
TRIM3-215ENST00000639856 HIF1AQ16665 826 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 OLFML1Q6UWY5 402 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 TDRPQ86YL5 185 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 ZBED8Q8IZ13 594 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 MICALL1Q8N3F8 863 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 SLC2A14Q8TDB8 520 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 DYDC1Q8WWB3 177 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 SENP8Q96LD8 212 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 SLC4A5Q9BY07 1137 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 B3GNT5Q9BYG0 378 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 KCNK9Q9NPC2 374 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 INPP5FQ9Y2H2 1132 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 TIMM13Q9Y5L4 95 aaPredicted RBP15.73■□□□□ 0.11
TRIM3-215ENST00000639856 DPYSL4O14531 572 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 MCF2LO15068 1137 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 PRPSAP2O60256 369 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 RBP3P10745 1247 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 RAB27AP51159 221 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 PDIA2Q13087 525 aaKnown RBP15.73■□□□□ 0.11
TRIM3-215ENST00000639856 MMRN1Q13201 1228 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 LRRC14Q15048 493 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 CDO1Q16878 200 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 RAB6CQ53S08 254 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 HP1BP3Q5SSJ5 553 aaPredicted RBP15.73■□□□□ 0.11
TRIM3-215ENST00000639856 KIAA0319Q5VV43 1072 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 PIGWQ7Z7B1 504 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 TMEM110Q86TL2 294 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 UNC45BQ8IWX7 931 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 SCUBE3Q8IX30 993 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 SRRM1Q8IYB3 904 aaKnown RBP15.73■□□□□ 0.11
TRIM3-215ENST00000639856 NAT8LQ8N9F0 302 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 SLC43A3Q8NBI5 491 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 SPATA18Q8TC71 538 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 CPT1BQ92523 772 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 MAML1Q92585 1016 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 MAK16Q9BXY0 300 aaKnown RBP15.73■□□□□ 0.11
TRIM3-215ENST00000639856 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.73■□□□□ 0.11
TRIM3-215ENST00000639856 RAB6CQ9H0N0 254 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 UNC93B1Q9H1C4 597 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 FSBPO95073 299 aa15.72■□□□□ 0.11
TRIM3-215ENST00000639856 VIMP08670 466 aaKnown RBP15.72■□□□□ 0.11
TRIM3-215ENST00000639856 GCAP28676 217 aa15.72■□□□□ 0.11
TRIM3-215ENST00000639856 DPYSL3Q14195 570 aa15.72■□□□□ 0.11
TRIM3-215ENST00000639856 CCDC14Q49A88 953 aa15.72■□□□□ 0.11
TRIM3-215ENST00000639856 PAN2Q504Q3 1202 aaKnown RBP15.72■□□□□ 0.11
TRIM3-215ENST00000639856 CCDC121Q6ZUS5 278 aa15.72■□□□□ 0.11
TRIM3-215ENST00000639856 RTN4RL1Q86UN2 441 aaPredicted RBP15.72■□□□□ 0.11
TRIM3-215ENST00000639856 CCDC13Q8IYE1 715 aa15.72■□□□□ 0.11
TRIM3-215ENST00000639856 B3GALNT2Q8NCR0 500 aa15.72■□□□□ 0.11
TRIM3-215ENST00000639856 CCDC197Q8NCU1 140 aa15.72■□□□□ 0.11
TRIM3-215ENST00000639856 MGARPQ8TDB4 240 aa15.72■□□□□ 0.11
TRIM3-215ENST00000639856 GOLGA8MH3BSY2 632 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 I3L4J1 428 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 SMAPO00193 183 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 PAPSS1O43252 624 aaPredicted RBP15.71■□□□□ 0.11
TRIM3-215ENST00000639856 SLC6A3Q01959 620 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 BST2Q10589 180 aaKnown RBP15.71■□□□□ 0.11
TRIM3-215ENST00000639856 NR1H3Q13133 447 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 MPP2Q14168 576 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 TFDP2Q14188 446 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 NOMO1Q15155 1222 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 UPP1Q16831 310 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 ANKRD22Q5VYY1 191 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 ECHDC2Q86YB7 292 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 ANKRD42Q8N9B4 389 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 ANKRD52Q8NB46 1076 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 CLEC4CQ8WTT0 213 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 STK32AQ8WU08 396 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 NSRP1Q9H0G5 558 aaKnown RBP15.71■□□□□ 0.11
TRIM3-215ENST00000639856 VPS37BQ9H9H4 285 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 PHF24Q9UPV7 400 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 RASA4BC9J798 803 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 ARVCFO00192 962 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 CLDN5O00501 218 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 GABRDO14764 452 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 RASA4O43374 803 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 STIP1P31948 543 aaKnown RBP15.71■□□□□ 0.11
TRIM3-215ENST00000639856 BCAT1P54687 386 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 ARL4CP56559 192 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 SNX16P57768 344 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 ATP11AP98196 1134 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 PDK2Q15119 407 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 TMED2Q15363 201 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 BOLA3Q53S33 107 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 MAP7D3Q8IWC1 876 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 ANKS4BQ8N8V4 417 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 FAM71DQ8N9W8 422 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 HASPINQ8TF76 798 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 LINC01599Q8WXQ3 324 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 P3H4Q92791 437 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 KHSRPQ92945 711 aaKnown RBP eCLIP15.71■□□□□ 0.11
TRIM3-215ENST00000639856 TNIP3Q96KP6 325 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 RNF157Q96PX1 679 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 PPCSQ9HAB8 311 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 SAGE1Q9NXZ1 904 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 SAMD15Q9P1V8 674 aa15.71■□□□□ 0.11
TRIM3-215ENST00000639856 POC1B-GALNT4F8VUJ3 575 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 SDC4P31431 198 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 ARHGEF6Q15052 776 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms