RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 XRCC4Q13426 336 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 FAM196AQ6ZSG2 479 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 HIST3H2AQ7L7L0 130 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 PROX1Q92786 737 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 HIST1H2ACQ93077 130 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 SERAC1Q96JX3 654 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 CITED4Q96RK1 184 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 ZNF341Q9BYN7 854 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 RSAD1Q9HA92 442 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 PRG2P13727 222 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 FAUP35544 74 aaKnown RBP13.5□□□□□ -0.25
UBE3A-228ENST00000638155 GJA8P48165 433 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 CNOT7Q9UIV1 285 aaKnown RBP13.5□□□□□ -0.25
UBE3A-228ENST00000638155 PHTF1Q9UMS5 762 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 DUOX2Q9NRD8 1548 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 A0A087WXM4 84 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 PRRG1O14668 218 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 UGT2B28Q9BY64 529 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 RIBC2Q9H4K1 309 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
UBE3A-228ENST00000638155 ZNF512Q96ME7 567 aaPredicted RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 RHOBTB2Q9BYZ6 727 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 SLC9A8Q9Y2E8 581 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 CROCCQ5TZA2 2017 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 O00370 1275 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 STAU1O95793 577 aaKnown RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 PRLP01236 227 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 GCP02774 474 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 PLCL1Q15111 1095 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 OTUD3Q5T2D3 398 aaPredicted RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 PACS1Q6VY07 963 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 OR52L1Q8NGH7 329 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 SLC20A1Q8WUM9 679 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 OSBPL5Q9H0X9 879 aaPredicted RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 PI4KBQ9UBF8 816 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 CLRN2A0PK11 232 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 ZNF185O15231 689 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 CHRNGP07510 517 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 PTGER2P43116 358 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 SYTL5Q8TDW5 730 aaPredicted RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 CHCHD6Q9BRQ6 235 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 LYVE1Q9Y5Y7 322 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 NCAPD2Q15021 1401 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 ARHGEF33A8MVX0 844 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 IL2P60568 153 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 RGS1Q08116 209 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 EXOC3L1Q86VI1 746 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 FAM111AQ96PZ2 611 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 SENP2Q9HC62 589 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 GPC6Q9Y625 555 aaPredicted RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 BIKQ13323 160 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 ARID5BQ14865 1188 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 RASA2Q15283 850 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 PLA2G4FQ68DD2 849 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 CLEC4GQ6UXB4 293 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 PIK3C3Q8NEB9 887 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 OR6Y1Q8NGX8 325 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 MED8Q96G25 268 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 EYA1Q99502 592 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 PUS7LQ9H0K6 701 aaKnown RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 ADPRHL2Q9NX46 363 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 SPEF1Q9Y4P9 236 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 KATNA1O75449 491 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 SUPT7LO94864 414 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 OMPP47874 163 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 PTGES3Q15185 160 aaKnown RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 STILQ15468 1287 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 BICRALQ6AI39 1079 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 MRNIPQ6NTE8 343 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 CXXC5Q7LFL8 322 aaKnown RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 SLC22A9Q8IVM8 553 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 SGF29Q96ES7 293 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 MAGEB10Q96LZ2 347 aaPredicted RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 DGCR6LQ9BY27 220 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 TBC1D24Q9ULP9 559 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 PSMD11O00231 422 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 PGK1P00558 417 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 TMEM132CQ8N3T6 1108 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 AMER2Q8N7J2 671 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 ENGASEQ8NFI3 743 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 USP7Q93009 1102 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 DGCR14Q96DF8 476 aaKnown RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 SEPHS2Q99611 448 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 AGO2Q9UKV8 859 aaKnown RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 TMEM5Q9Y2B1 443 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 SLCO1B7G3V0H7 640 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 PLOD2O00469 737 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 IRF1P10914 325 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 ERO1BQ86YB8 467 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 MYO1HQ8N1T3 1032 aa13.49□□□□□ -0.25
UBE3A-228ENST00000638155 MAGEE2Q8TD90 523 aaPredicted RBP13.49□□□□□ -0.25
UBE3A-228ENST00000638155 TSPAN4O14817 238 aa13.48□□□□□ -0.25
UBE3A-228ENST00000638155 ULK1O75385 1050 aa13.48□□□□□ -0.25
UBE3A-228ENST00000638155 ANXA9O76027 345 aa13.48□□□□□ -0.25
UBE3A-228ENST00000638155 FDFT1P37268 417 aa13.48□□□□□ -0.25
UBE3A-228ENST00000638155 ETFBP38117 255 aa13.48□□□□□ -0.25
UBE3A-228ENST00000638155 MAD2L1Q13257 205 aaPredicted RBP13.48□□□□□ -0.25
UBE3A-228ENST00000638155 CDH3P22223 829 aa13.48□□□□□ -0.25
UBE3A-228ENST00000638155 ITGA8P53708 1063 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms