RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 EEF1DP3Q658K8 133 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 ALYREFQ86V81 257 aaKnown RBP20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 PDCD7Q8N8D1 485 aaKnown RBP20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 SMC1BQ8NDV3 1235 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 NRG4Q8WWG1 115 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 RXFP2Q8WXD0 754 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 WWP1Q9H0M0 922 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 CDT1Q9H211 546 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 ARMCX1Q9P291 453 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 ZNF212Q9UDV6 495 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 ASB3Q9Y575 518 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 TBX10O75333 385 aa20.89■□□□□ 0.93
SYNGAP1-227ENST00000638142 RFPL1O75677 317 aa20.89■□□□□ 0.93
SYNGAP1-227ENST00000638142 KRT38O76015 456 aa20.89■□□□□ 0.93
SYNGAP1-227ENST00000638142 ATP5BP06576 529 aaKnown RBP20.89■□□□□ 0.93
SYNGAP1-227ENST00000638142 MRPS5P82675 430 aaKnown RBP20.89■□□□□ 0.93
SYNGAP1-227ENST00000638142 SH3PXD2AQ5TCZ1 1133 aa20.89■□□□□ 0.93
SYNGAP1-227ENST00000638142 TMEM154Q6P9G4 183 aa20.89■□□□□ 0.93
SYNGAP1-227ENST00000638142 CAND1Q86VP6 1230 aaKnown RBP20.89■□□□□ 0.93
SYNGAP1-227ENST00000638142 SCG3Q8WXD2 468 aaKnown RBP20.89■□□□□ 0.93
SYNGAP1-227ENST00000638142 TSC22D3Q99576 134 aa20.89■□□□□ 0.93
SYNGAP1-227ENST00000638142 VRTNQ9H8Y1 702 aa20.89■□□□□ 0.93
SYNGAP1-227ENST00000638142 BCLAF3A2AJT9 711 aaKnown RBP20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 CXorf49A8MYA2 514 aaPredicted RBP20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 ZBTB42B2RXF5 422 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 INO80B-WBP1J3KQ70 363 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 B4GALT5O43286 388 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 ZBED1O96006 694 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 APOEP02649 317 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 NFICP08651 508 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 ATICP31939 592 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 AP1B1Q10567 949 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 PPFIBP2Q8ND30 876 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 INO80BQ9C086 356 aaPredicted RBP20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 VCXQ9H320 206 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 ETNK2Q9NVF9 386 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 TNFSF13BQ9Y275 285 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 SPDYE5A6NIY4 337 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 F8W8V4 182 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 APOL1O14791 398 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 UPP2O95045 317 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 P4HA1P13674 534 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 BOLA3Q53S33 107 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 TRNP1Q6NT89 227 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 SLC30A9Q6PML9 568 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 C4orf22Q6V702 233 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 MCUQ8NE86 351 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 MECRQ9BV79 373 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 PLAC1Q9HBJ0 212 aa20.88■□□□□ 0.93
SYNGAP1-227ENST00000638142 B2RBV5 119 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 ITGB3P05106 788 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 SP100P23497 879 aaPredicted RBP20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 BCAR1P56945 870 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 SARNPP82979 210 aaKnown RBP20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 C15orf59Q2T9L4 293 aaPredicted RBP20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 TEX44Q53QW1 395 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 TMEM192Q8IY95 271 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 USP6NLQ92738 828 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 HEXIM2Q96MH2 286 aaKnown RBP20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 MGAMO43451 1857 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 APRTP07741 180 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 RBL1P28749 1068 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 GCLCP48506 637 aaPredicted RBP20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 CHI3L2Q15782 390 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 TBCCQ15814 346 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 CDR2LQ86X02 465 aaPredicted RBP20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 NUDCD3Q8IVD9 361 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 ARID3BQ8IVW6 561 aaPredicted RBP20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 TEKT4Q8WW24 435 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 NLRP4Q96MN2 994 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 ACAP3Q96P50 834 aa20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 PPARGC1AQ9UBK2 798 aaKnown RBP20.87■□□□□ 0.93
SYNGAP1-227ENST00000638142 SLC15A5A6NIM6 579 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 H3BRJ5 948 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 SMIM24O75264 130 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 LGR5O75473 907 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 IL4RP24394 825 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 THOC5Q13769 683 aaKnown RBP20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 HSF5Q4G112 596 aaPredicted RBP20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 THEMIS2Q5TEJ8 643 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 SLC9A4Q6AI14 798 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 OR6B2Q6IFH4 312 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 FAM183BPQ6ZVS7 135 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 CRLF3Q8IUI8 442 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 PQLC3Q8N755 202 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 CXorf38Q8TB03 319 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 UBA3Q8TBC4 463 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 FZD1Q9UP38 647 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 SOWAHBA6NEL2 793 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 BIRC5O15392 142 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 GMPSP49915 693 aaPredicted RBP20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 CDO1Q16878 200 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 RAB6CQ53S08 254 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 TREML1Q86YW5 311 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 ZBTB10Q96DT7 871 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 SLC13A1Q9BZW2 595 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 RAB6CQ9H0N0 254 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 ASCC2Q9H1I8 757 aaPredicted RBP20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 SMYD2Q9NRG4 433 aa20.86■□□□□ 0.93
SYNGAP1-227ENST00000638142 TAGLN3Q9UI15 199 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms