RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 RRAGAQ7L523 313 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 BHLHA9Q7RTU4 235 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 MIB1Q86YT6 1006 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 PPM1KQ8N3J5 372 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 PHTF2Q8N3S3 785 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 CCDC33Q8N5R6 958 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 ANKRD52Q8NB46 1076 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 USP33Q8TEY7 942 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 NT5C1BQ96P26 610 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 PARD6AQ9NPB6 346 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 TBC1D14Q9P2M4 693 aa18.65■□□□□ 0.58
PNKP-230ENST00000638016 O00370 1275 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 ADH1CP00326 375 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 HNRNPLP14866 589 aaKnown RBP eCLIP18.64■□□□□ 0.57
PNKP-230ENST00000638016 BRD2P25440 801 aaKnown RBP18.64■□□□□ 0.57
PNKP-230ENST00000638016 KCNH2Q12809 1159 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 DMC1Q14565 340 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 SGO2Q562F6 1265 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 RAB41Q5JT25 222 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 WDR5BQ86VZ2 330 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 TTC39CQ8N584 583 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 KIAA1958Q8N8K9 716 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 ULBP1Q9BZM6 244 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 SPHK2Q9NRA0 654 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 RASAL2Q9UJF2 1139 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 PCDHB4Q9Y5E5 795 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 DNAH14Q0VDD8 3507 aa18.64■□□□□ 0.57
PNKP-230ENST00000638016 RALGAPA1Q6GYQ0 2036 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 PIK3R2O00459 728 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 ATG13O75143 517 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 GABBR2O75899 941 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 KAT7O95251 611 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 HMBSP08397 361 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 TGM1P22735 817 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 TBXAS1P24557 533 aaPredicted RBP18.63■□□□□ 0.57
PNKP-230ENST00000638016 HOXA6P31267 233 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 TKTL1P51854 596 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 ANO4Q32M45 955 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 FOXR2Q6PJQ5 311 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 TPGS1Q6ZTW0 290 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 HTR3DQ70Z44 454 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 SYT13Q7L8C5 426 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 ETFBKMTQ8IXQ9 262 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 BHMTQ93088 406 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 RMDN1Q96DB5 314 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 KREMEN1Q96MU8 473 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 PNKPQ96T60 521 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 ARHGEF4Q9NR80 690 aa18.63■□□□□ 0.57
PNKP-230ENST00000638016 NEDD8-MDP1E9PL57 170 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 XPO1O14980 1071 aaKnown RBP18.62■□□□□ 0.57
PNKP-230ENST00000638016 PMM2O15305 246 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 HOXC11O43248 304 aaPredicted RBP18.62■□□□□ 0.57
PNKP-230ENST00000638016 TULP3O75386 442 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 STC2O76061 302 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 KLKB1P03952 638 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 VDRP11473 427 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 TIE1P35590 1138 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 RGS7P49802 495 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 BCAT1P54687 386 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 MARSP56192 900 aaKnown RBP18.62■□□□□ 0.57
PNKP-230ENST00000638016 YWHAGP61981 247 aaKnown RBP eCLIP18.62■□□□□ 0.57
PNKP-230ENST00000638016 APBA1Q02410 837 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 GAD2Q05329 585 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 SPEM2Q0P670 501 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 ADIGQ0VDE8 80 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 EFEMP1Q12805 493 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 PKDCCQ504Y2 493 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 GJB7Q6PEY0 223 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 Q6ZNB5 142 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 CREBRFQ8IUR6 639 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 ALLCQ8N6M5 410 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 TRIML1Q8N9V2 468 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 EXOC4Q96A65 974 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 DNAI2Q9GZS0 605 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 INTS2Q9H0H0 1204 aaKnown RBP18.62■□□□□ 0.57
PNKP-230ENST00000638016 DNMT3LQ9UJW3 386 aa18.62■□□□□ 0.57
PNKP-230ENST00000638016 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.62■□□□□ 0.57
PNKP-230ENST00000638016 ABCA7Q8IZY2 2146 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 DCLK1O15075 740 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 AFPP02771 609 aaKnown RBP18.61■□□□□ 0.57
PNKP-230ENST00000638016 APODP05090 189 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 YWHAEP62258 255 aaKnown RBP18.61■□□□□ 0.57
PNKP-230ENST00000638016 BST2Q10589 180 aaKnown RBP18.61■□□□□ 0.57
PNKP-230ENST00000638016 KLHDC10Q6PID8 442 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 TMEM92Q6UXU6 159 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 CEP68Q76N32 757 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 FAM160A2Q8N612 972 aaPredicted RBP18.61■□□□□ 0.57
PNKP-230ENST00000638016 RBBP8NLQ8NC74 664 aaPredicted RBP18.61■□□□□ 0.57
PNKP-230ENST00000638016 EHBP1Q8NDI1 1231 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 ACDQ96AP0 544 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 OTUB2Q96DC9 234 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 CNOT6LQ96LI5 555 aaKnown RBP18.61■□□□□ 0.57
PNKP-230ENST00000638016 CRACR2AQ9BSW2 395 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 TPSD1Q9BZJ3 242 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 CLSTN2Q9H4D0 955 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 FAM124BQ9H5Z6 455 aaPredicted RBP18.61■□□□□ 0.57
PNKP-230ENST00000638016 PLK2Q9NYY3 685 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 HESX1Q9UBX0 185 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 RWDD2AQ9UIY3 292 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 GMEB2Q9UKD1 530 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms