RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 CTXN3Q4LDR2 81 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 SLC39A12Q504Y0 691 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 ANKRD20A8PQ5CZ79 823 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 PPP6R3Q5H9R7 873 aaPredicted RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 RAB41Q5JT25 222 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 VARS2Q5ST30 1063 aaKnown RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 SPOUT1Q5T280 376 aaKnown RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 FAM171A1Q5VUB5 890 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 TXNRD3NBQ6F5E7 133 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 DARS2Q6PI48 645 aaKnown RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 VSTM1Q6UX27 236 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 CD300LGQ6UXG3 332 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 LRIG3Q6UXM1 1119 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 C4orf22Q6V702 233 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 PDZD4Q76G19 769 aaPredicted RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 CEP57Q86XR8 500 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 CDKL3Q8IVW4 592 aaPredicted RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 SCN4BQ8IWT1 228 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 ZDHHC14Q8IZN3 488 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 SCML4Q8N228 414 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 ARHGAP18Q8N392 663 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 ALLCQ8N6M5 410 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 ARFGAP1Q8N6T3 406 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 OR10T2Q8NGX3 314 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 SLC7A14Q8TBB6 771 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 CLEC4CQ8WTT0 213 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 C2orf15Q8WU43 125 aaKnown RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 CENPIQ92674 756 aaPredicted RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 KHSRPQ92945 711 aaKnown RBP eCLIP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 NKD2Q969F2 451 aaPredicted RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 RNF34Q969K3 372 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 ARMC5Q96C12 935 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 PIWIL1Q96J94 861 aaKnown RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 ZNF333Q96JL9 665 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 CASD1Q96PB1 797 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 RNF157Q96PX1 679 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 SLC2A13Q96QE2 648 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 SLC9A7Q96T83 725 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 RTP3Q9BQQ7 232 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 SNRNP25Q9BV90 132 aaKnown RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 ZCWPW1Q9H0M4 648 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 FBXO44Q9H4M3 255 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 DHX35Q9H5Z1 703 aaKnown RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 NRDE2Q9H7Z3 1164 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 ABCC13Q9NSE7 274 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 ABI2Q9NYB9 513 aaPredicted RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 FAM53CQ9NYF3 392 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 RCOR3Q9P2K3 495 aaPredicted RBP6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 DNAJB4Q9UDY4 337 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 ANAPC5Q9UJX4 755 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 DNPEPQ9ULA0 475 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 PCDHB5Q9Y5E4 795 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 NLRC5Q86WI3 1866 aa6.56□□□□□ -1.36
CACNA1D-227ENST00000637844 SYNJ2BP-COX16A0A087WUM0 186 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 ABHD14A-ACY1A0A1B0GW23 586 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 H7C0C1 242 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 SMAPO00193 183 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 GABBR2O75899 941 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 STK10O94804 968 aaKnown RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 ENDOD1O94919 500 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 UPP2O95045 317 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 RTN3O95197 1032 aaPredicted RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 ITGB1P05556 798 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 FAM153BP0C7A2 387 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 RBP3P10745 1247 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 CPB1P15086 417 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 FGFR3P22607 806 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 IGFBP6P24592 240 aaPredicted RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 STIP1P31948 543 aaKnown RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 CYP2C18P33260 490 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 MAGEA11P43364 429 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 ATP5OP48047 213 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 NR2C2P49116 596 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 SLC11A1P49279 550 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 NDUFV1P49821 464 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 PMS2P54278 862 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 EIF3BP55884 814 aaKnown RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 DHX9Q08211 1270 aaKnown RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 IFRD2Q12894 506 aaPredicted RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 GPS1Q13098 491 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 NME3Q13232 169 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 TRADDQ15628 312 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 TRIP13Q15645 432 aaPredicted RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 DPYSL2Q16555 572 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 FAM153CQ494X1 144 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 ZC3H12AQ5D1E8 599 aaKnown RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 SH3PXD2AQ5TCZ1 1133 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 IZUMO3Q5VZ72 239 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 BTBD8Q5XKL5 378 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 DENND2CQ68D51 928 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 PM20D1Q6GTS8 502 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 KIAA1841Q6NSI8 718 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 TRNP1Q6NT89 227 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 FUT10Q6P4F1 479 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 C1orf228Q6PIY5 440 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 ANKS3Q6ZW76 656 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 TRMT10CQ7L0Y3 403 aaKnown RBP6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 BEND5Q7L4P6 421 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 TMC3Q7Z5M5 1100 aa6.55□□□□□ -1.36
CACNA1D-227ENST00000637844 NECAB2Q7Z6G3 386 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms