RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 NUDT5Q9UKK9 219 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 CCL26Q9Y258 94 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 DPYSL4O14531 572 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 ECI2O75521 394 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 TBX18O95935 607 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 CYP1A1P04798 512 aaPredicted RBP18.04■□□□□ 0.48
CLN6-218ENST00000637223 RALAP11233 206 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 PRKCIP41743 596 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 PSEN1P49768 467 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 TUBP50607 506 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 CLEC16AQ2KHT3 1053 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 TDRD12Q587J7 1177 aaKnown RBP18.04■□□□□ 0.48
CLN6-218ENST00000637223 TRIM72Q6ZMU5 477 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 ZNF571Q7Z3V5 609 aaPredicted RBP18.04■□□□□ 0.48
CLN6-218ENST00000637223 SCML4Q8N228 414 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 SYN2Q92777 582 aaPredicted RBP18.04■□□□□ 0.48
CLN6-218ENST00000637223 SYT11Q9BT88 431 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 TRPV4Q9HBA0 871 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 SMPD4Q9NXE4 827 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 IGSF9Q9P2J2 1179 aa18.04■□□□□ 0.48
CLN6-218ENST00000637223 HEPACAM2A8MVW5 462 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 MDM4O15151 490 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 OLFM2O95897 454 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 MBL2P11226 248 aaPredicted RBP18.03■□□□□ 0.48
CLN6-218ENST00000637223 PFKLP17858 780 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 TNFAIP3P21580 790 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 WEE1P30291 646 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 ADKP55263 362 aaKnown RBP18.03■□□□□ 0.48
CLN6-218ENST00000637223 TBX2Q13207 712 aaPredicted RBP18.03■□□□□ 0.48
CLN6-218ENST00000637223 GRM2Q14416 872 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 C2CD6Q53TS8 623 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 C10orf120Q5SQS8 335 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 BSPRYQ5W0U4 402 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 BTBD8Q5XKL5 378 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 HGSNATQ68CP4 663 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 OR6B2Q6IFH4 312 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 FAM183BPQ6ZVS7 135 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 ERICH1Q86X53 443 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 SLC30A5Q8TAD4 765 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 OLIG1Q8TAK6 271 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 IRGQQ8WZA9 623 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 EDEM1Q92611 657 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 ELSPBP1Q96BH3 223 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 PIWIL1Q96J94 861 aaKnown RBP18.03■□□□□ 0.48
CLN6-218ENST00000637223 TDP1Q9NUW8 608 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 CLIC5Q9NZA1 410 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 CPQQ9Y646 472 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 GREB1Q4ZG55 1949 aa18.03■□□□□ 0.48
CLN6-218ENST00000637223 MFAP3LO75121 409 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 ADCY5O95622 1261 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 LTFP02788 710 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 SERPING1P05155 500 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 UNGP13051 313 aaPredicted RBP18.02■□□□□ 0.48
CLN6-218ENST00000637223 SNX16P57768 344 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 SLC7A9P82251 487 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 VITQ6UXI7 678 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 MMS22LQ6ZRQ5 1243 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 RSRC2Q7L4I2 434 aaKnown RBP18.02■□□□□ 0.48
CLN6-218ENST00000637223 SLC44A3Q8N4M1 653 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 CELF5Q8N6W0 485 aaKnown RBP18.02■□□□□ 0.48
CLN6-218ENST00000637223 MSANTD4Q8NCY6 345 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 RIN3Q8TB24 985 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 GOLGA1Q92805 767 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 NXPE3Q969Y0 559 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 FAM149B1Q96BN6 582 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 LRRC3BQ96PB8 259 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 SMOC2Q9H3U7 446 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 GRPEL1Q9HAV7 217 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 ARHGAP26Q9UNA1 814 aa18.02■□□□□ 0.48
CLN6-218ENST00000637223 ZDBF2Q9HCK1 2354 aa18.02■□□□□ 0.47
CLN6-218ENST00000637223 AKR1B15C9JRZ8 316 aaPredicted RBP18.01■□□□□ 0.47
CLN6-218ENST00000637223 SART1O43290 800 aaKnown RBP18.01■□□□□ 0.47
CLN6-218ENST00000637223 PLEKP08567 350 aaPredicted RBP18.01■□□□□ 0.47
CLN6-218ENST00000637223 ATP5C1P36542 298 aaKnown RBP18.01■□□□□ 0.47
CLN6-218ENST00000637223 NSFP46459 744 aaKnown RBP18.01■□□□□ 0.47
CLN6-218ENST00000637223 ZXDBP98169 803 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 CENPCQ03188 943 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 EFEMP1Q12805 493 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 TDGQ13569 410 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 ZNF268Q14587 947 aaPredicted RBP18.01■□□□□ 0.47
CLN6-218ENST00000637223 TAF5Q15542 800 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 TADA2BQ86TJ2 420 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 FBXL6Q8N531 539 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 OR8K1Q8NGG5 319 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 SH3RF2Q8TEC5 729 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 RNF139Q8WU17 664 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 E2F7Q96AV8 911 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 C18orf8Q96DM3 657 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 DNAJC7Q99615 494 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 C11orf70Q9BRQ4 267 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 KIF9Q9HAQ2 790 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 ABCC13Q9NSE7 274 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 ABHD10Q9NUJ1 306 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 RASAL2Q9UJF2 1139 aa18.01■□□□□ 0.47
CLN6-218ENST00000637223 MYH10P35580 1976 aa18■□□□□ 0.47
CLN6-218ENST00000637223 TMCO5BA8MYB1 307 aa18■□□□□ 0.47
CLN6-218ENST00000637223 LEFTY2O00292 366 aa18■□□□□ 0.47
CLN6-218ENST00000637223 DDX3XO00571 662 aaKnown RBP eCLIP18■□□□□ 0.472e-13■■■□□ 16.8
CLN6-218ENST00000637223 NARSO43776 548 aaKnown RBP18■□□□□ 0.47
CLN6-218ENST00000637223 GRAP2O75791 330 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms