RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 PAPLNO95428 1278 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 LRG1P02750 347 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 C8AP07357 584 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 RALAP11233 206 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 USP46P62068 366 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 TAF10Q12962 218 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 TUBB2AQ13885 445 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 RPS6KA1Q15418 735 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 DUSP6Q16828 381 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 DCAF6Q58WW2 860 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 PPM1LQ5SGD2 360 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 PAPD7Q5XG87 772 aaKnown RBP14□□□□□ -0.17
LINC00643-207ENST00000637212 BTBD8Q5XKL5 378 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 TRNP1Q6NT89 227 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 CC2D1AQ6P1N0 951 aaPredicted RBP14□□□□□ -0.17
LINC00643-207ENST00000637212 STRADAQ7RTN6 431 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 ELMOD1Q8N336 334 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 SLC7A14Q8TBB6 771 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 FBXO32Q969P5 355 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 PGAP3Q96FM1 320 aaPredicted RBP14□□□□□ -0.17
LINC00643-207ENST00000637212 HES6Q96HZ4 224 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 CDK5RAP1Q96SZ6 601 aaKnown RBP14□□□□□ -0.17
LINC00643-207ENST00000637212 NPY6RQ99463 290 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 TUBB2BQ9BVA1 445 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 ZDHHC7Q9NXF8 308 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 PCDHA3Q9Y5H8 950 aa14□□□□□ -0.17
LINC00643-207ENST00000637212 A0A1W2PQH9 124 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 CCDC66A2RUB6 948 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 SPOPO43791 374 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 FGF19O95750 216 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 FTCDO95954 541 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 NCAM1P13591 858 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 CTNNA2P26232 953 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 ZNF252P-AS1Q0IIN9 211 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 MTMR3Q13615 1198 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 HADHQ16836 314 aaKnown RBP13.99□□□□□ -0.17
LINC00643-207ENST00000637212 HFE2Q6ZVN8 426 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 BNIPLQ7Z465 357 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 TADA2BQ86TJ2 420 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 UBL4BQ8N7F7 174 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 GDPD5Q8WTR4 605 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 RNF139Q8WU17 664 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 CD101Q93033 1021 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 CFAP57Q96MR6 1250 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 TLR10Q9BXR5 811 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 OLA1Q9NTK5 396 aaKnown RBP13.99□□□□□ -0.17
LINC00643-207ENST00000637212 TRPM5Q9NZQ8 1165 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 GMIPQ9P107 970 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 NAALADL1Q9UQQ1 740 aa13.99□□□□□ -0.17
LINC00643-207ENST00000637212 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.99□□□□□ -0.17
LINC00643-207ENST00000637212 ZNF840PA6NDX5 716 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 PER2O15055 1255 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 POU3F3P20264 500 aaPredicted RBP13.98□□□□□ -0.17
LINC00643-207ENST00000637212 GBP1P32455 592 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 PEX5P50542 639 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 IFRD2Q12894 506 aaPredicted RBP13.98□□□□□ -0.17
LINC00643-207ENST00000637212 KCNC3Q14003 757 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 BOLA3Q53S33 107 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 SYPL2Q5VXT5 272 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 MSANTD2Q6P1R3 559 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 KLHDC10Q6PID8 442 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 TMEM184AQ6ZMB5 413 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 RHOT1Q8IXI2 618 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 ARFGAP1Q8N6T3 406 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 LEMD2Q8NC56 503 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 STKLD1Q8NE28 680 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 NMUR1Q9HB89 426 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 MAN1C1Q9NR34 630 aa13.98□□□□□ -0.17
LINC00643-207ENST00000637212 MAGED2Q9UNF1 606 aaPredicted RBP13.98□□□□□ -0.17
LINC00643-207ENST00000637212 SOBPA7XYQ1 873 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 RFXAPO00287 272 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 CES2O00748 559 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 PSTPIP1O43586 416 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 XYLBO75191 536 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 LRCH4O75427 683 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 F11P03951 625 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 KRT7P08729 469 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 RARGP13631 454 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 EPCAMP16422 314 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 PTPN2P17706 415 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 PFKLP17858 780 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 TCP1P17987 556 aaKnown RBP13.97□□□□□ -0.17
LINC00643-207ENST00000637212 CTNNA1P35221 906 aaKnown RBP13.97□□□□□ -0.17
LINC00643-207ENST00000637212 RDXP35241 583 aaKnown RBP13.97□□□□□ -0.17
LINC00643-207ENST00000637212 NRIP1P48552 1158 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 TUBP50607 506 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 KPNA1P52294 538 aaPredicted RBP13.97□□□□□ -0.17
LINC00643-207ENST00000637212 EIF4EBP2Q13542 120 aaPredicted RBP13.97□□□□□ -0.17
LINC00643-207ENST00000637212 DNTTIP2Q5QJE6 756 aaKnown RBP13.97□□□□□ -0.17
LINC00643-207ENST00000637212 POLNQ7Z5Q5 900 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 ADGRD2Q7Z7M1 963 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 RBM23Q86U06 439 aaKnown RBP13.97□□□□□ -0.17
LINC00643-207ENST00000637212 PSTKQ8IV42 348 aaKnown RBP13.97□□□□□ -0.17
LINC00643-207ENST00000637212 CMASQ8NFW8 434 aaPredicted RBP13.97□□□□□ -0.17
LINC00643-207ENST00000637212 FAM172AQ8WUF8 416 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 ZNF592Q92610 1267 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 EDEM1Q92611 657 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 CASP10Q92851 521 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 PBKQ96KB5 322 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 TBCBQ99426 244 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms