RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 PRKAG3Q9UGI9 489 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 SMIM28A0A1B0GU29 152 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 FOXO6A8MYZ6 492 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 INHBAP08476 426 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 KRT4P19013 534 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 IL4RP24394 825 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 MAGEA6P43360 314 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 CRYBB1P53674 252 aaPredicted RBP12.61□□□□□ -0.39
CLN8-212ENST00000637083 ZNF200P98182 395 aaPredicted RBP12.61□□□□□ -0.39
CLN8-212ENST00000637083 SNX17Q15036 470 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 SETDB1Q15047 1291 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 ZKSCAN8Q15776 578 aaPredicted RBP12.61□□□□□ -0.39
CLN8-212ENST00000637083 MSS51Q4VC12 460 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 STRADAQ7RTN6 431 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 PSTKQ8IV42 348 aaKnown RBP12.61□□□□□ -0.39
CLN8-212ENST00000637083 FUKQ8N0W3 1084 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 C4orf33Q8N1A6 199 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 CCDC63Q8NA47 563 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 MCUQ8NE86 351 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 DNAJB3Q8WWF6 145 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 KHSRPQ92945 711 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLN8-212ENST00000637083 C18orf25Q96B23 403 aaPredicted RBP12.61□□□□□ -0.39
CLN8-212ENST00000637083 APOL6Q9BWW8 343 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 NXF3Q9H4D5 531 aaKnown RBP12.61□□□□□ -0.39
CLN8-212ENST00000637083 RAB6BQ9NRW1 208 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLN8-212ENST00000637083 RCOR3Q9P2K3 495 aaPredicted RBP12.61□□□□□ -0.39
CLN8-212ENST00000637083 HEY1Q9Y5J3 304 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 TCRBV7S3A2A0A539 114 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 TRDMT1O14717 391 aaKnown RBP12.6□□□□□ -0.39
CLN8-212ENST00000637083 PPEF2O14830 753 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 ATP5HO75947 161 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 CELF2O95319 508 aaKnown RBP12.6□□□□□ -0.39
CLN8-212ENST00000637083 MT-ND3P03897 115 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 CYP2F1P24903 491 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 RPA3P35244 121 aaPredicted RBP12.6□□□□□ -0.39
CLN8-212ENST00000637083 ELK3P41970 407 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 HDAC4P56524 1084 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 YWHAGP61981 247 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLN8-212ENST00000637083 SARNPP82979 210 aaKnown RBP12.6□□□□□ -0.39
CLN8-212ENST00000637083 GLRA4Q5JXX5 417 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 PRAMEF19Q5SWL8 479 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 TOP6BLQ8N6T0 577 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 PQLC3Q8N755 202 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 PCDH19Q8TAB3 1148 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 MRRFQ96E11 262 aaKnown RBP12.6□□□□□ -0.39
CLN8-212ENST00000637083 NRDE2Q9H7Z3 1164 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 ETNK2Q9NVF9 386 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 PHTF1Q9UMS5 762 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 CHMP2BQ9UQN3 213 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 HES2Q9Y543 173 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 TEX264Q9Y6I9 313 aa12.6□□□□□ -0.39
CLN8-212ENST00000637083 C17orf102A2RUQ5 167 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 HACD1B0YJ81 288 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 HAS3O00219 553 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 XPO1O14980 1071 aaKnown RBP12.59□□□□□ -0.39
CLN8-212ENST00000637083 BANF1O75531 89 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 WARSP23381 471 aaKnown RBP12.59□□□□□ -0.39
CLN8-212ENST00000637083 RBL1P28749 1068 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 ADORA2BP29275 332 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 ARL4AP40617 200 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 ADAM17P78536 824 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 GALNTL6Q49A17 601 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 SLC45A4Q5BKX6 768 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 PPP6R3Q5H9R7 873 aaPredicted RBP12.59□□□□□ -0.39
CLN8-212ENST00000637083 FYB2Q5VWT5 728 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 CYB5D1Q6P9G0 228 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 HACE1Q8IYU2 909 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 VPS52Q8N1B4 723 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 C11orf84Q9BUA3 381 aaPredicted RBP12.59□□□□□ -0.39
CLN8-212ENST00000637083 DHX35Q9H5Z1 703 aaKnown RBP12.59□□□□□ -0.39
CLN8-212ENST00000637083 CDHR5Q9HBB8 845 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 ABCF3Q9NUQ8 709 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 TMEM51Q9NW97 253 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLN8-212ENST00000637083 GTF2IRD1Q9UHL9 959 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 AP4E1Q9UPM8 1137 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 USH1CQ9Y6N9 552 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 A0A1W2PPM1 405 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 GCATO75600 419 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 DCTN3O75935 186 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 PDGFRBP09619 1106 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 ALADP13716 330 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 LCP1P13796 627 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 TPSB2P20231 275 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 AKAP5P24588 427 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 L1CAMP32004 1257 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 FOXN2P32314 431 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 SKIV2L2P42285 1042 aaKnown RBP12.59□□□□□ -0.39
CLN8-212ENST00000637083 MNAT1P51948 309 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 GAD2Q05329 585 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 PTK7Q13308 1070 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 TPSAB1Q15661 275 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 SNCBQ16143 134 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 FAM133BQ5BKY9 247 aaKnown RBP12.59□□□□□ -0.39
CLN8-212ENST00000637083 MORN1Q5T089 497 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 LVRNQ6Q4G3 990 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 LIMS2Q7Z4I7 341 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 PARP9Q8IXQ6 854 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms