RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 SOX10P56693 466 aa16.59■□□□□ 0.25
CLN5-208ENST00000636183 EFL1Q7Z2Z2 1120 aaKnown RBP16.59■□□□□ 0.25
CLN5-208ENST00000636183 CYP4Z1Q86W10 505 aa16.59■□□□□ 0.25
CLN5-208ENST00000636183 FAM172AQ8WUF8 416 aa16.59■□□□□ 0.25
CLN5-208ENST00000636183 ASCC2Q9H1I8 757 aaPredicted RBP16.59■□□□□ 0.25
CLN5-208ENST00000636183 FBXO44Q9H4M3 255 aa16.59■□□□□ 0.25
CLN5-208ENST00000636183 SPATA31D3P0C874 917 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 UCHL3P15374 230 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 ZNF24P17028 368 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 S100A5P33763 92 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 SPATA31D4Q6ZUB0 917 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 GALNT4Q8N4A0 578 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 BBS4Q96RK4 519 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 SYT15Q9BQS2 421 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 TRIM9Q9C026 710 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 BRD9Q9H8M2 597 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 SIK3Q9Y2K2 1263 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 CXCL8P10145 99 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 ARP10275 920 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 RETSATQ6NUM9 610 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 GPC2Q8N158 579 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 DPP10Q8N608 796 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 UNKQ9C0B0 810 aaKnown RBP16.58■□□□□ 0.25
CLN5-208ENST00000636183 KLHL3Q9UH77 587 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 TRPV2Q9Y5S1 764 aa16.58■□□□□ 0.25
CLN5-208ENST00000636183 TRAV19A0A0A6YYK7 116 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 GLP2RO95838 553 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 GARTP22102 1010 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 FLT3P36888 993 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 CXCL17Q6UXB2 119 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 SERPINA13PQ6UXR4 307 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 ATG9AQ7Z3C6 839 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 CASP10Q92851 521 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 CXorf40BQ96DE9 158 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 PPP1R16AQ96I34 528 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 ZNF333Q96JL9 665 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 ZCCHC2Q9C0B9 1178 aaKnown RBP16.58■□□□□ 0.24
CLN5-208ENST00000636183 CAAP1Q9H8G2 361 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 SAMD9LQ8IVG5 1584 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 GOLGA8TH3BQL2 631 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 CLTBP09497 229 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 CYP2A7P20853 494 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 CCNG1P51959 295 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 PLOD1Q02809 727 aaPredicted RBP16.58■□□□□ 0.24
CLN5-208ENST00000636183 DET1Q7L5Y6 550 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 CDK20Q8IZL9 346 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 CENPLQ8N0S6 344 aaPredicted RBP16.58■□□□□ 0.24
CLN5-208ENST00000636183 OR10G6Q8NH81 332 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 PHF2O75151 1096 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 VDRP11473 427 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 PPIL2Q13356 520 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 TLE6Q9H808 572 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 SLC9A8Q9Y2E8 581 aa16.58■□□□□ 0.24
CLN5-208ENST00000636183 RRP15Q9Y3B9 282 aaKnown RBP16.58■□□□□ 0.24
CLN5-208ENST00000636183 TCP11X1B4DZS4 312 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 MAPK1P28482 360 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 NFIAQ12857 509 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 CBWD2Q8IUF1 395 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 ETNK1Q9HBU6 452 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 CNTNAP4Q9C0A0 1308 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 CNGA3Q16281 694 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 FBXO47Q5MNV8 452 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 SYDE1Q6ZW31 735 aaPredicted RBP16.57■□□□□ 0.24
CLN5-208ENST00000636183 TRAPPC11Q7Z392 1133 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 STAMBPL1Q96FJ0 436 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 ARHGAP9Q9BRR9 750 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 UBE2OQ9C0C9 1292 aaKnown RBP16.57■□□□□ 0.24
CLN5-208ENST00000636183 NFIBO00712 420 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 ACAP2Q15057 778 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 C16orf89Q6UX73 402 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 TRAPPC12Q8WVT3 735 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 ASAH2Q9NR71 780 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 PSMC3IPQ9P2W1 217 aaPredicted RBP16.57■□□□□ 0.24
CLN5-208ENST00000636183 HNRNPRO43390 633 aaKnown RBP16.57■□□□□ 0.24
CLN5-208ENST00000636183 F9P00740 461 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 PYGMP11217 842 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 COMTP21964 271 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 MUTP22033 750 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 HSPA9P38646 679 aaKnown RBP16.57■□□□□ 0.24
CLN5-208ENST00000636183 ERVK-9P63128 1117 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 ERVK-24P63145 666 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 CCDC149Q6ZUS6 474 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 ILDR2Q71H61 639 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 P2RX7Q99572 595 aaKnown RBP16.57■□□□□ 0.24
CLN5-208ENST00000636183 POP1Q99575 1024 aaKnown RBP16.57■□□□□ 0.24
CLN5-208ENST00000636183 ELOVL6Q9H5J4 265 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 PIF1Q9H611 641 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 SCN3BQ9NY72 215 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 RPS6KL1Q9Y6S9 549 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 IL1BP01584 269 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 CASP4P49662 377 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 CSNK2BP67870 215 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 TRIM71Q2Q1W2 868 aaKnown RBP16.57■□□□□ 0.24
CLN5-208ENST00000636183 CEP78Q5JTW2 689 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 ATAD3BQ5T9A4 648 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 DENND1BQ6P3S1 775 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 PHACTR1Q9C0D0 580 aa16.57■□□□□ 0.24
CLN5-208ENST00000636183 ERI2A8K979 691 aaKnown RBP16.56■□□□□ 0.24
CLN5-208ENST00000636183 CNPP09543 421 aaKnown RBP16.56■□□□□ 0.24
CLN5-208ENST00000636183 SERPINB10P48595 397 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms