RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	NCAM1	P13591	858 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	TCF4	P15884	667 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	TFE3	P19532	575 aa	Predicted RBP	10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PCK1	P35558	622 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PGF	P49763	221 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PEX5	P50542	639 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	EPHB3	P54753	998 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	HDAC4	P56524	1084 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	TAS2R40	P59535	323 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	ATP11A	P98196	1134 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	SLC25A11	Q02978	314 aa	Known RBP	10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	MLLT1	Q03111	559 aa	Predicted RBP	10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	TAF10	Q12962	218 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	VEPH1	Q14D04	833 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	RPS6KA1	Q15418	735 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	C15orf59	Q2T9L4	293 aa	Predicted RBP	10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	DCAF6	Q58WW2	860 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	SH3PXD2A	Q5TCZ1	1133 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	LRRC38	Q5VT99	294 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	OTUD1	Q5VV17	481 aa	Predicted RBP	10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	RTL10	Q7L3V2	364 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	STRADA	Q7RTN6	431 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	RHOT1	Q8IXI2	618 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	KREMEN2	Q8NCW0	462 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	FAM172A	Q8WUF8	416 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	SLC22A17	Q8WUG5	538 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	OVCA2	Q8WZ82	227 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	ALG3	Q92685	438 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	KRT35	Q92764	455 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	FBXO32	Q969P5	355 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PSMG2	Q969U7	264 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PGAP3	Q96FM1	320 aa	Predicted RBP	10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	ADAM33	Q9BZ11	813 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	NMUR1	Q9HB89	426 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	ABCC13	Q9NSE7	274 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	OSER1	Q9NX31	292 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	RRN3	Q9NYV6	651 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	GMIP	Q9P107	970 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	CALCOCO1	Q9P1Z2	691 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	STAP1	Q9ULZ2	295 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	UST	Q9Y2C2	406 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PCDHA3	Q9Y5H8	950 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	SAR1B	Q9Y6B6	198 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	CHD9	Q3L8U1	2897 aa		10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	LAMA2	P24043	3122 aa	Known RBP	10.02	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PSTPIP1	O43586	416 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	URI1	O94763	535 aa	Predicted RBP	10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	ENDOD1	O94919	500 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	DES	P17661	470 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	TCP1	P17987	556 aa	Known RBP	10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	MIP	P30301	263 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	MARCKSL1	P49006	195 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PSEN1	P49768	467 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	SULT1E1	P49888	294 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PITX1	P78337	314 aa	Predicted RBP	10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	CDO1	Q16878	200 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	LRIT3	Q3SXY7	679 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	RAB6C	Q53S08	254 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	SNX30	Q5VWJ9	437 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	BTBD8	Q5XKL5	378 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	POLN	Q7Z5Q5	900 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	ADGRD2	Q7Z7M1	963 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	ITIH5	Q86UX2	942 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	UBL4B	Q8N7F7	174 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PDZD8	Q8NEN9	1154 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	HDAC7	Q8WUI4	952 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	EDEM1	Q92611	657 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	SLITRK1	Q96PX8	696 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	OSBPL9	Q96SU4	736 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	TBCB	Q99426	244 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	NCAPG	Q9BPX3	1015 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	RAB6C	Q9H0N0	254 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PLEKHA4	Q9H4M7	779 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	TLR8	Q9NR97	1041 aa	Known RBP	10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	CLIC5	Q9NZA1	410 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	ASB3	Q9Y575	518 aa		10.01	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PDE4DIP	Q5VU43	2346 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058		M0QYT0	321 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	CES2	O00748	559 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	KCNK3	O14649	394 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PER2	O15055	1255 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	SRGAP2	O75044	1071 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	ZMYND10	O75800	440 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	IGLV3-25	P01717	112 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	LRG1	P02750	347 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	EPCAM	P16422	314 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	IL1R2	P27930	398 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	HOXA9	P31269	272 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	CXCR5	P32302	372 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	RDX	P35241	583 aa	Known RBP	10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	SSR1	P43307	286 aa	Known RBP	10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	PPP3CC	P48454	512 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	DNA2	P51530	1060 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	RWDD2B	P57060	319 aa		10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	EIF4EBP2	Q13542	120 aa	Predicted RBP	10	□□□□□ -0.81
CACNA1A-223	ENST00000636058	TUBB2A	Q13885	445 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms