RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 LMAN2LQ9H0V9 348 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 ECT2Q9H8V3 914 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 ABCF3Q9NUQ8 709 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 TAS2R14Q9NYV8 317 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 UVRAGQ9P2Y5 699 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 SIX4Q9UIU6 781 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 NUB1Q9Y5A7 615 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 HIDE1A8MVS5 230 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 PIRO00625 290 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 C2CD2LO14523 706 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 MAPK13O15264 365 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 SPTLC1O15269 473 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 KRT19P08727 400 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 COMTP21964 271 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 VAMP7P51809 220 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 RWDD2BP57060 319 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 PPARDQ03181 441 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 RNF43Q68DV7 783 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 ARHGEF18Q6ZSZ5 1173 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 MICAL1Q8TDZ2 1067 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 NSMCE1Q8WV22 266 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 KLHL29Q96CT2 875 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 PRKAG3Q9UGI9 489 aa16.2■□□□□ 0.18
CLN8-209ENST00000635970 SMIM23A6NLE4 172 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 FSCN2O14926 492 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 TNNC2P02585 160 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 CALRP27797 417 aaKnown RBP16.19■□□□□ 0.18
CLN8-209ENST00000635970 ARHGAP44Q17R89 818 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 DUOXA2Q1HG44 320 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 TIGD5Q53EQ6 642 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 RTP2Q5QGT7 225 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 FAM171A1Q5VUB5 890 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 SPATA21Q7Z572 469 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 GRK7Q8WTQ7 553 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 KRT35Q92764 455 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 RAB3IPQ96QF0 476 aaPredicted RBP16.19■□□□□ 0.18
CLN8-209ENST00000635970 HERC2P3Q9BVR0 1158 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 AGAP1Q9UPQ3 857 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 PLXNA3P51805 1871 aa16.19■□□□□ 0.18
CLN8-209ENST00000635970 TMEM120BA0PK00 339 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 TCP11X1B4DZS4 312 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 CTSAP10619 480 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 PYGMP11217 842 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 TKTP29401 623 aaKnown RBP16.18■□□□□ 0.18
CLN8-209ENST00000635970 IFNAR2P48551 515 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 ATP11AP98196 1134 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 ZKSCAN8Q15776 578 aaPredicted RBP16.18■□□□□ 0.18
CLN8-209ENST00000635970 CCDC85BQ15834 202 aaPredicted RBP16.18■□□□□ 0.18
CLN8-209ENST00000635970 TDRD10Q5VZ19 366 aaKnown RBP16.18■□□□□ 0.18
CLN8-209ENST00000635970 PPP1R21Q6ZMI0 780 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 MAGEB18Q96M61 343 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 CDC42EP4Q9H3Q1 356 aaKnown RBP16.18■□□□□ 0.18
CLN8-209ENST00000635970 KLHL14Q9P2G3 628 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 ITGA11Q9UKX5 1188 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.18■□□□□ 0.18
CLN8-209ENST00000635970 TTC4O95801 387 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 CYP1A2P05177 515 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 CCNB1P14635 433 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 POU3F3P20264 500 aaPredicted RBP16.18■□□□□ 0.18
CLN8-209ENST00000635970 LILRA4P59901 499 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 MCCD1P59942 119 aaPredicted RBP16.18■□□□□ 0.18
CLN8-209ENST00000635970 CLDN10P78369 228 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 PPP3CAQ08209 521 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 MYO1EQ12965 1108 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 MESDQ14696 234 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 NAA25Q14CX7 972 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 SIX1Q15475 284 aaPredicted RBP16.18■□□□□ 0.18
CLN8-209ENST00000635970 NUGGCQ68CJ6 796 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 RHBDF2Q6PJF5 856 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 ASRGL1Q7L266 308 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 RBM23Q86U06 439 aaKnown RBP16.18■□□□□ 0.18
CLN8-209ENST00000635970 BBOF1Q8ND07 529 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 TMC2Q8TDI7 906 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 AGAP11Q8TF27 550 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 STAMBPL1Q96FJ0 436 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 CCDC77Q9BR77 488 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 UBE2TQ9NPD8 197 aaPredicted RBP16.18■□□□□ 0.18
CLN8-209ENST00000635970 CHST7Q9NS84 486 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 LGALS13Q9UHV8 139 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 GTF3C4Q9UKN8 822 aa16.18■□□□□ 0.18
CLN8-209ENST00000635970 C2orf71A6NGG8 1288 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 LUC7L3O95232 432 aaKnown RBP16.17■□□□□ 0.18
CLN8-209ENST00000635970 CST3P01034 146 aaPredicted RBP16.17■□□□□ 0.18
CLN8-209ENST00000635970 URODP06132 367 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 RPSAP08865 295 aaKnown RBP16.17■□□□□ 0.18
CLN8-209ENST00000635970 SLCO1A2P46721 670 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 GLUD2P49448 558 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 USP41Q3LFD5 358 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 TCEAL5Q5H9L2 206 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 PRSS55Q6UWB4 352 aaPredicted RBP16.17■□□□□ 0.18
CLN8-209ENST00000635970 PALB2Q86YC2 1186 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 RELL1Q8IUW5 271 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 ZDHHC14Q8IZN3 488 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 RIBC1Q8N443 379 aaPredicted RBP16.17■□□□□ 0.18
CLN8-209ENST00000635970 ELMO3Q96BJ8 720 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 SNF8Q96H20 258 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 FGFR1OP2Q9NVK5 253 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 LMCD1Q9NZU5 365 aa16.17■□□□□ 0.18
CLN8-209ENST00000635970 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.17■□□□□ 0.18
CLN8-209ENST00000635970 UNC80Q8N2C7 3258 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms