RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 PARP6Q2NL67 630 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 GLB1LQ6UWU2 654 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SUGP1Q8IWZ8 645 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 KCTD13Q8WZ19 329 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 DDX23Q9BUQ8 820 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 LRRC40Q9H9A6 602 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 RXFP1Q9HBX9 757 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 PNPLA8Q9NP80 782 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 C2CD4BA6NLJ0 364 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 CELF2O95319 508 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 COL6A1P12109 1028 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 WARSP23381 471 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 ZNF157P51786 506 aaPredicted RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 TAS2R40P59535 323 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 NAA20P61599 178 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 DNAL1Q4LDG9 190 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SEZ6Q53EL9 994 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 RGS9BPQ6ZS82 235 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 NLRP9Q7RTR0 991 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 ACOT1Q86TX2 421 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 TRABD2AQ86V40 505 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 INPP5DQ92835 1189 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 WNT8BQ93098 351 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 PRKD2Q9BZL6 878 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 ZFATQ9P243 1243 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 DDX20Q9UHI6 824 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 ADAM28Q9UKQ2 775 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SCAF8Q9UPN6 1271 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 KBTBD13C9JR72 458 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 E7ENQ6 273 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 TGDSO95455 350 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SMIM10L2AP0DMW4 78 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SMIM10L2BP0DMW5 78 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 KRT10P13645 584 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 ECHS1P30084 290 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 MXRA7P84157 204 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 OASLQ15646 514 aaKnown RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 PDK4Q16654 411 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 CYP4A22Q5TCH4 519 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 BTBD8Q5XKL5 378 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SMARCD1Q96GM5 515 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 XYLT2Q9H1B5 865 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 NEUROG2Q9H2A3 272 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 KLC4Q9NSK0 619 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 TCP11X1B4DZS4 312 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 E5RJQ4 531 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 VTNP04004 478 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SLC10A6Q3KNW5 377 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 RNF180Q86T96 592 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SETD3Q86TU7 594 aaPredicted RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 APLFQ8IW19 511 aaPredicted RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 UBA3Q8TBC4 463 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 NTAN1Q96AB6 310 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 APOPT1Q96IL0 206 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 DDX50Q9BQ39 737 aaKnown RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SETD4Q9NVD3 440 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 NOP53Q9NZM5 478 aaKnown RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 STOML1Q9UBI4 398 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 GPR25O00155 361 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 FGF10O15520 208 aaPredicted RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 B4GALT5O43286 388 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 DUSP11O75319 330 aaKnown RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 RPL22P35268 128 aaKnown RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 RPL7AP62424 266 aaKnown RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 DGKZQ13574 1117 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 EXOC3L1Q86VI1 746 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 PPM1NQ8N819 430 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 FAM71DQ8N9W8 422 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 HTR3CQ8WXA8 447 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 PIK3R5Q8WYR1 880 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 CDK5RAP1Q96SZ6 601 aaKnown RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 TMEM121Q9BTD3 319 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 MMADHCQ9H3L0 296 aaPredicted RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 BAIAP2L1Q9UHR4 511 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 BTBD19C9JJ37 291 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SLCO1B7G3V0H7 640 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 CCND1P24385 295 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 KLRC2P26717 231 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 PAPOLAP51003 745 aaKnown RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 C9orf57Q5W0N0 161 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 KYAT3Q6YP21 454 aaKnown RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 PARP9Q8IXQ6 854 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SYT15Q9BQS2 421 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 BCAS3Q9H6U6 928 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 CYB561D2O14569 222 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 C6orf222P0C671 652 aaPredicted RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 HOXD8P13378 290 aaPredicted RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 CYP2F1P24903 491 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 GEMP55040 296 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 HDAC4P56524 1084 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SLC25A52Q3SY17 297 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 GNASQ5JWF2 1037 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 PID1Q7Z2X4 250 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 ZC3H18Q86VM9 953 aaKnown RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 KIAA0319LQ8IZA0 1049 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 MAGEC3Q8TD91 643 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 PRCCQ92733 491 aaPredicted RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SGIP1Q9BQI5 828 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SYT17Q9BSW7 474 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms