RNA–Protein interactions for RNA: ENST00000633167.1

PHACTR4-208, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 5

Gene PHACTR4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-208ENST00000633167 SNX15Q9NRS6 342 aa3.71□□□□□ -1.82
PHACTR4-208ENST00000633167 SNX14Q9Y5W7 946 aa3.71□□□□□ -1.82
PHACTR4-208ENST00000633167 SYNMO15061 1565 aa3.71□□□□□ -1.82
PHACTR4-208ENST00000633167 UNC79Q9P2D8 2635 aa3.71□□□□□ -1.82
PHACTR4-208ENST00000633167 CNTLNQ9NXG0 1405 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 NOTCH4Q99466 2003 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 MYO1CO00159 1063 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 POU2F2P09086 479 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 CCND1P24385 295 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 ADORA2AP29274 412 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 SLC11A2P49281 568 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 CTCFP49711 727 aaPredicted RBP3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 UCP3P55916 312 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 HSF1Q00613 529 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 PSG6Q00889 435 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 KRT17Q04695 432 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 KHDC1LQ5JSQ8 128 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 CERCAMQ5T4B2 595 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 TMTC4Q5T4D3 741 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 PTCHD4Q6ZW05 846 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 RBMXL3Q8N7X1 1067 aaKnown RBP3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 PCGF6Q9BYE7 350 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 SPC25Q9HBM1 224 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 DHX57Q6P158 1386 aaKnown RBP3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 SUPT6HQ7KZ85 1726 aaKnown RBP3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 TNKSO95271 1327 aa3.7□□□□□ -1.82
PHACTR4-208ENST00000633167 MSH6P52701 1360 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 ALG1L2C9J202 215 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 CES2O00748 559 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 PMPCBO75439 489 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 APEHP13798 732 aaKnown RBP3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 HYAL1Q12794 435 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 LMAN2Q12907 356 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 MLC1Q15049 377 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 CCDC157Q569K6 752 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 TMEM240Q5SV17 173 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 TMEM65Q6PI78 240 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 VSTM1Q6UX27 236 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 COLCA1Q6ZS62 124 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 Q6ZTC4 211 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 ZNF280BQ86YH2 543 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 C16orf71Q8IYS4 520 aaPredicted RBP3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 C17orf80Q9BSJ5 609 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 CCDC8Q9H0W5 538 aaPredicted RBP3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 CNNM1Q9NRU3 951 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 TMEM184CQ9NVA4 438 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 HECW1Q76N89 1606 aa3.69□□□□□ -1.82
PHACTR4-208ENST00000633167 STRCP1A6NGW2 1772 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 NRKQ7Z2Y5 1582 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 PKD1L2Q7Z442 2459 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 CHD4Q14839 1912 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 EP400Q96L91 3159 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 A2ML1A8K2U0 1454 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 A0A087WWL8 130 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 TGFB3P10600 412 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 AKAP5P24588 427 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 DEKP35659 375 aaKnown RBP3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 PRKAG1P54619 331 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 BCAT1P54687 386 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 CCNIQ14094 377 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 LY6KQ17RY6 165 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 ZIK1Q3SY52 487 aaPredicted RBP3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 EGFLAMQ63HQ2 1017 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 RANBP10Q6VN20 620 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 DPY19L3Q6ZPD9 716 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 MMP21Q8N119 569 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 ZNF548Q8NEK5 533 aaPredicted RBP3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 LRRC59Q96AG4 307 aaKnown RBP3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 TRIM36Q9NQ86 728 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 PIH1D1Q9NWS0 290 aaKnown RBP3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 PCDHA6Q9UN73 950 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 MYO3AQ8NEV4 1616 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 KDM5DQ9BY66 1539 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 FANCIQ9NVI1 1328 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 UNC13BO14795 1591 aa3.68□□□□□ -1.82
PHACTR4-208ENST00000633167 CCDC88BA6NC98 1476 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 ZMYM4Q5VZL5 1548 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 DLC1Q96QB1 1528 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 GTPBP1O00178 669 aaKnown RBP3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 FOXN3O00409 490 aaPredicted RBP3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 TMPRSS11DO60235 418 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 KATNA1O75449 491 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 VNN1O95497 513 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 CYP19A1P11511 503 aaPredicted RBP3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 VCAM1P19320 739 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 CDKN2AP42771 156 aaKnown RBP3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 COPB1P53618 953 aaKnown RBP3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 SEC23BQ15437 767 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 SLC9C1Q4G0N8 1177 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 LMBRD2Q68DH5 695 aaPredicted RBP3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 DCDC5Q6ZRR9 648 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 PELI3Q8N2H9 469 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 IPO4Q8TEX9 1081 aaKnown RBP3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 CTHRC1Q96CG8 243 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 MVB12AQ96EY5 273 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 CCDC136Q96JN2 1154 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 ZSCAN32Q9NX65 697 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 SELENONQ9NZV5 590 aa3.67□□□□□ -1.82
PHACTR4-208ENST00000633167 PROCRQ9UNN8 238 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms