RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 ARF5P84085 180 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PPP2R2BQ00005 443 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CAP1Q01518 475 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 NONOQ15233 471 aaKnown RBP eCLIP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CMPK2Q5EBM0 449 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 RNF219Q5W0B1 726 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 FAM196AQ6ZSG2 479 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ILDR2Q71H61 639 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 RRAGAQ7L523 313 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF677Q86XU0 584 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CREG2Q8IUH2 290 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ZDHHC17Q8IUH5 632 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 NUDCD3Q8IVD9 361 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 GALNT12Q8IXK2 581 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 POC1BQ8TC44 478 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 EPS8L1Q8TE68 723 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PIGKQ92643 395 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PHKBQ93100 1093 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ZDHHC12Q96GR4 267 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 TMEM60Q9H2L4 133 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 GOLPH3LQ9H4A5 285 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 C19orf44Q9H6X5 657 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ARMC1Q9NVT9 282 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SIRPGQ9P1W8 387 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SNX7Q9UNH6 387 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 RPH3AQ9Y2J0 694 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ADCY9O60503 1353 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 A0A1W2PQ67 120 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 M0R3H8 397 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ULK1O75385 1050 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CCNKO75909 580 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ANXA6P08133 673 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ATP2A2P16615 1042 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 POLR2CP19387 275 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 BMI1P35226 326 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 AFMP43652 599 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ATP1A2P50993 1020 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 KCNJ10P78508 379 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF45Q02386 682 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 MRPL58Q14197 206 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 MFSD10Q14728 455 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 LLGL1Q15334 1064 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC14A2Q15849 920 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 MYLK3Q32MK0 819 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 KCNT1Q5JUK3 1230 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 KRBOX4Q5JUW0 171 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ANKRD40Q6AI12 368 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 TXNDC11Q6PKC3 985 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC22A25Q6T423 547 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 TMC7Q7Z402 723 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CDH26Q8IXH8 852 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 NSUN7Q8NE18 718 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ADAM32Q8TC27 787 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PRCCQ92733 491 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CAVIN3Q969G5 261 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 MSANTD3Q96H12 275 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 FAM20AQ96MK3 541 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 C19orf43Q9BQ61 176 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 NTPCRQ9BSD7 190 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 GORASP2Q9H8Y8 452 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ACTR3BQ9P1U1 418 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PGAP2Q9UHJ9 254 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 TRMT6Q9UJA5 497 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 THSD7AQ9UPZ6 1657 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 A0A1B0GVL5 298 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 E2F8A0AVK6 867 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 A8MV72 311 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 KCNJ18B7U540 433 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 HGSO14964 777 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SCAMP2O15127 329 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PQBP1O60828 265 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 OPHN1O60890 802 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 RGS20O76081 388 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ITGA2BP08514 1039 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 UMPSP11172 480 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CPEP16870 476 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 KRT15P19012 456 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 EEF1DP29692 281 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ADKP55263 362 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 GNG2P59768 71 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 RACK1P63244 317 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 MPP1Q00013 466 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 UBE3AQ05086 875 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 TRIM32Q13049 653 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 KCNJ12Q14500 433 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF268Q14587 947 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 XKR3Q5GH77 459 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PPP1R26Q5T8A7 1209 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 FAM102BQ5T8I3 360 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 INTS11Q5TA45 600 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PMF1Q6P1K2 205 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SPOCD1Q6ZMY3 1216 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ATG14Q6ZNE5 492 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 Q6ZUG5 572 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 C16orf59Q7L2K0 433 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 TRAPPC11Q7Z392 1133 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PEX26Q7Z412 305 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 MICU3Q86XE3 530 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CROCCP3Q8IVE0 287 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CSGALNACT2Q8N6G5 542 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms