RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 HSPH1Q92598 858 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 HOMER3Q9NSC5 361 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 CLDND1Q9NY35 253 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 TTLL3Q9Y4R7 772 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 PCDHA3Q9Y5H8 950 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 C8AP07357 584 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 WARSP23381 471 aaKnown RBP13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 RTP2Q5QGT7 225 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 TMC5Q6UXY8 1006 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 MICALCLQ6ZW33 695 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 SRLQ86TD4 932 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 OSTM1Q86WC4 334 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 SH2D3CQ8N5H7 860 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 DDX1Q92499 740 aaKnown RBP13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 SMG7Q92540 1137 aaKnown RBP13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 EPB41L4BQ9H329 900 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 PRDM12Q9H4Q4 367 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 ASAH2Q9NR71 780 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 MRPS23Q9Y3D9 190 aaKnown RBP13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 PCDHA11Q9Y5I1 949 aa13.01□□□□□ -0.33
SYNGAP1-207ENST00000628646 LCHNA4D1U4 455 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 E5RJQ4 531 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 GZMAP12544 262 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 C3orf58Q8NDZ4 430 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 MAGOHBQ96A72 148 aaKnown RBP13□□□□□ -0.33
SYNGAP1-207ENST00000628646 GDAP2Q9NXN4 497 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 AMACRQ9UHK6 382 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 SH3BP1Q9Y3L3 701 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 TET1Q8NFU7 2136 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 MTA2O94776 668 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 PEX5P50542 639 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 RWDD2BP57060 319 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 HOOK3Q86VS8 718 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 MAP7D3Q8IWC1 876 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 SLC4A11Q8NBS3 891 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 TWNKQ96RR1 684 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 XYLT2Q9H1B5 865 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 LSM7Q9UK45 103 aaKnown RBP13□□□□□ -0.33
SYNGAP1-207ENST00000628646 LRRD1A4D1F6 860 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 RFXAPO00287 272 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 CSH1P0DML2 217 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 CSH2P0DML3 217 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 RRM1P23921 792 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 PBX2P40425 430 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 ROR1Q01973 937 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 AADACL2Q6P093 401 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 GSTA5Q7RTV2 222 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 SLC39A11Q8N1S5 342 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 EMC1Q8N766 993 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 BHMTQ93088 406 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 DDIT4Q9NX09 232 aa13□□□□□ -0.33
SYNGAP1-207ENST00000628646 LINC01553A4QN01 128 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 RTN3O95197 1032 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 RB1P06400 928 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 HSD17B3P37058 310 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 ARL4AP40617 200 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 TWF1Q12792 350 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 CPNE8Q86YQ8 564 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 ARHGAP18Q8N392 663 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 RHOBTB2Q9BYZ6 727 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 TLR8Q9NR97 1041 aaKnown RBP12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 LSM8O95777 96 aaKnown RBP12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 MARCKSL1P49006 195 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 DEUP1Q05D60 604 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 ADAT2Q7Z6V5 191 aaKnown RBP12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 CARD9Q9H257 536 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 ZDHHC18Q9NUE0 388 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 TTI1O43156 1089 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 CREB3O43889 395 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 FMO1Q01740 532 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 CLEC16AQ2KHT3 1053 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 NUP93Q8N1F7 819 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 KCTD6Q8NC69 237 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 BBOF1Q8ND07 529 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 KRT35Q92764 455 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 DUSP16Q9BY84 665 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 SDCBP2Q9H190 292 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 ZBED1O96006 694 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 KRT1P04264 644 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 LMNB2Q03252 620 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 SMARCB1Q12824 385 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 PDCLQ13371 301 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 FAM109BQ6ICB4 259 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 C11orf63Q6NUN7 778 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 TFAP2BQ92481 460 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 KCNK16Q96T55 309 aa12.99□□□□□ -0.33
SYNGAP1-207ENST00000628646 M0QYT0 321 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 O00370 1275 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 EIF3HO15372 352 aaKnown RBP eCLIP12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 FBXO21O94952 628 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 FGGP02679 453 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 GABRR2P28476 465 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 SIX1Q15475 284 aaPredicted RBP12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 RARS2Q5T160 578 aaKnown RBP12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 VSTM1Q6UX27 236 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 C15orf39Q6ZRI6 1047 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 TMEM209Q96SK2 561 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 UXTQ9UBK9 157 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms