RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 SCN1AP35498 2009 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 CASP8AP2Q9UKL3 1982 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 BCLAF3A2AJT9 711 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 LACTBL1A8MY62 500 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 MDM4O15151 490 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 DNAJC6O75061 913 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 TGDSO95455 350 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 SETSIPP0DME0 302 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 PRKAR2AP13861 404 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 MIPP30301 263 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 CCNFP41002 786 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 PPM1FP49593 454 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 ARL4CP56559 192 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 DPYSL3Q14195 570 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 SPARCL1Q14515 664 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 SLC10A6Q3KNW5 377 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 FAM47CQ5HY64 1035 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 JADE1Q6IE81 842 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 PPP1R13LQ8WUF5 828 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 UTP4Q969X6 686 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 VPS11Q9H270 941 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 RMI1Q9H9A7 625 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 BARX2Q9UMQ3 279 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 GINS2Q9Y248 185 aa7.47□□□□□ -1.21
CTNNA1-244ENST00000627109 INO80B-WBP1J3KQ70 363 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 C2CD2LO14523 706 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 PIAS1O75925 651 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 CD48P09326 243 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 C6orf222P0C671 652 aaPredicted RBP7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 CXCL8P10145 99 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 TXNP10599 105 aaKnown RBP7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 TGM2P21980 687 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 RPA3P35244 121 aaPredicted RBP7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 TRIM32Q13049 653 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 PDK2Q15119 407 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 ZRSR2Q15696 482 aaKnown RBP7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 SLC1A5Q15758 541 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 SMTNL2Q2TAL5 461 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 ZNF792Q3KQV3 632 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 CMPK2Q5EBM0 449 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 ZNF667Q5HYK9 610 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 HHATQ5VTY9 493 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 OLFML1Q6UWY5 402 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 ALKAL1Q6UXT8 129 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 C4orf22Q6V702 233 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 TMEM110Q86TL2 294 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 ANKMY2Q8IV38 441 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 UNC45BQ8IWX7 931 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 C4orf33Q8N1A6 199 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 SLC44A1Q8WWI5 657 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 LENG1Q96BZ8 264 aaPredicted RBP7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 TINF2Q9BSI4 451 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 CNPY3Q9BT09 278 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 INO80BQ9C086 356 aaPredicted RBP7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 SMYD3Q9H7B4 428 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 ECT2Q9H8V3 914 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 RPF1Q9H9Y2 349 aaKnown RBP7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 NOD2Q9HC29 1040 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 METTL5Q9NRN9 209 aaKnown RBP7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 KANSL3Q9P2N6 904 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 PCSK1NQ9UHG2 260 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 EVLQ9UI08 416 aaPredicted RBP7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 USP18Q9UMW8 372 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 CHKBQ9Y259 395 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 IKBKGQ9Y6K9 419 aa7.46□□□□□ -1.21
CTNNA1-244ENST00000627109 ZNF638Q14966 1978 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 TCRBV7S3A2A0A539 114 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 SLC15A5A6NIM6 579 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 CST8O60676 142 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 STAG3L1P0CL83 205 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 T-ENOLP0DO92 83 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 CA4P22748 312 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 PRKCHP24723 683 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 PHBP35232 272 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 PSMC1P62191 440 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 GAD2Q05329 585 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 ORC1Q13415 861 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 SETDB1Q15047 1291 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 EFCAB12Q6NXP0 572 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 ARMCX2Q7L311 632 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 ZBED8Q8IZ13 594 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 LRRC71Q8N4P6 559 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 CEP120Q8N960 986 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 MCUQ8NE86 351 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 PPTC7Q8NI37 304 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 NPLOC4Q8TAT6 608 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 NLRP4Q96MN2 994 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 TBCBQ99426 244 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 SPC25Q9HBM1 224 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 PDGFCQ9NRA1 345 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 ERAP1Q9NZ08 941 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 PHTF1Q9UMS5 762 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 USH1CQ9Y6N9 552 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 TRPM7Q96QT4 1865 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 ASB14A6NK59 587 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 PIK3R2O00459 728 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 CTGFP29279 349 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 GRM5P41594 1212 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 PHKA2P46019 1235 aa7.46□□□□□ -1.22
CTNNA1-244ENST00000627109 PDIA2Q13087 525 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms