RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 HNRNPH3P31942 346 aaKnown RBP20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 ATP5C1P36542 298 aaKnown RBP20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 PGFP49763 221 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 ZNF268Q14587 947 aaPredicted RBP20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 BSPRYQ5W0U4 402 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 HGSNATQ68CP4 663 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 TANGO2Q6ICL3 276 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 TOGARAM2Q6ZUX3 1019 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 BHLHA9Q7RTU4 235 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 ZDHHC17Q8IUH5 632 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 ZNF276Q8N554 614 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 CLEC4CQ8WTT0 213 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 FGF14Q92915 247 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 ELSPBP1Q96BH3 223 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 SLC22A12Q96S37 553 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 SYT11Q9BT88 431 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 SMG9Q9H0W8 520 aaKnown RBP20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 KCNK12Q9HB15 430 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 OLA1Q9NTK5 396 aaKnown RBP20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 ABHD10Q9NUJ1 306 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 OSER1Q9NX31 292 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 OBP2AQ9NY56 170 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 TJP2Q9UDY2 1190 aa20.03■□□□□ 0.8
SQSTM1-216ENST00000626660 PRAMEF12O95522 483 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 OLFM2O95897 454 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 ASGR2P07307 311 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 UNGP13051 313 aaPredicted RBP20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 FCARP24071 287 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 VIPR2P41587 438 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 GABRB2P47870 512 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 ADKP55263 362 aaKnown RBP20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 SLC7A9P82251 487 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 CENPCQ03188 943 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 ARID5BQ14865 1188 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 EFHC1Q5JVL4 640 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 KLHDC10Q6PID8 442 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 MMS22LQ6ZRQ5 1243 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 FAM183BPQ6ZVS7 135 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 DDX42Q86XP3 938 aaKnown RBP eCLIP20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 RNF135Q8IUD6 432 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 ST13P5Q8NFI4 369 aaPredicted RBP20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 SLC30A5Q8TAD4 765 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 USP13Q92995 863 aaPredicted RBP20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 RNF38Q9H0F5 515 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 DNMT3LQ9UJW3 386 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 STRIP2Q9ULQ0 834 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 ARHGAP26Q9UNA1 814 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 HCN4Q9Y3Q4 1203 aa20.02■□□□□ 0.8
SQSTM1-216ENST00000626660 FAM170AA1A519 330 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 HEPACAM2A8MVW5 462 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 GOLGA6L6A8MZA4 724 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 CALB1P05937 261 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 GLI1P08151 1106 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 MMP8P22894 467 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 GOLGA8FQ08AF8 430 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 GOLGA8DPQ0D2H9 430 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 HFE2Q6ZVN8 426 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 YAF2Q8IY57 180 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 DEPDC1BQ8WUY9 529 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 RSAD2Q8WXG1 361 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 EDEM1Q92611 657 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 C11orf70Q9BRQ4 267 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 ASNSD1Q9NWL6 643 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 SMPD4Q9NXE4 827 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 ADAM22Q9P0K1 906 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 CPQQ9Y646 472 aa20.01■□□□□ 0.79
SQSTM1-216ENST00000626660 CAPN9O14815 690 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 HSF2BPO75031 334 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 TBX18O95935 607 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 YWHAZP63104 245 aaKnown RBP20■□□□□ 0.79
SQSTM1-216ENST00000626660 SLC6A3Q01959 620 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 EFEMP1Q12805 493 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 TDGQ13569 410 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 ACAD10Q6JQN1 1059 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 OLFML1Q6UWY5 402 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 XYLT1Q86Y38 959 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 PHF13Q86YI8 300 aaPredicted RBP20■□□□□ 0.79
SQSTM1-216ENST00000626660 MFSD6LQ8IWD5 586 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 TTC16Q8NEE8 873 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 SH3RF2Q8TEC5 729 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 GRPEL1Q9HAV7 217 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 POPDC2Q9HBU9 364 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 CD320Q9NPF0 282 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 THG1LQ9NWX6 298 aaKnown RBP20■□□□□ 0.79
SQSTM1-216ENST00000626660 WDR35Q9P2L0 1181 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 RASAL2Q9UJF2 1139 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 NUDT5Q9UKK9 219 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 CCL26Q9Y258 94 aa20■□□□□ 0.79
SQSTM1-216ENST00000626660 TMCO5BA8MYB1 307 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 GOLGA8SH3BPF8 625 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 DDX3XO00571 662 aaKnown RBP eCLIP19.99■□□□□ 0.793e-52■■■□□ 17.8
SQSTM1-216ENST00000626660 GZMAP12544 262 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 NCAM1P13591 858 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 PSMC3P17980 439 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 SCNN1AP37088 669 aa19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 C1QBPQ07021 282 aaKnown RBP19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 FAM102AQ5T9C2 384 aaPredicted RBP19.99■□□□□ 0.79
SQSTM1-216ENST00000626660 VITQ6UXI7 678 aa19.99■□□□□ 0.79
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