RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 CRLF3Q8IUI8 442 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 NIM1KQ8IY84 436 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 PDIK1LQ8N165 341 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 NUP93Q8N1F7 819 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 NIPA2Q8N8Q9 360 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 ICA1LQ8NDH6 482 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 FBXO36Q8NEA4 188 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 GDPD5Q8WTR4 605 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CPT1BQ92523 772 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TTC17Q96AE7 1141 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 SERAC1Q96JX3 654 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 FAM111AQ96PZ2 611 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 UIMC1Q96RL1 719 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CSRNP1Q96S65 589 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 RIT2Q99578 217 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CBWD1Q9BRT8 395 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 NRDE2Q9H7Z3 1164 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 USP29Q9HBJ7 922 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 ACP6Q9NPH0 428 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 PARVAQ9NVD7 372 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 FAIMQ9NVQ4 179 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 PPARGC1AQ9UBK2 798 aaKnown RBP4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 ZNHIT2Q9UHR6 403 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 ADAMTS6Q9UKP5 1117 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CNOT11Q9UKZ1 510 aaKnown RBP4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CNTN6Q9UQ52 1028 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TMX2Q9Y320 296 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 SH3GLB1Q9Y371 365 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 A0A0B4J269 797 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TCRBV5S1A1TA0A578 114 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TMEM191CA6NGB0 347 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 E5RJQ4 531 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 E9PBE3 544 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 H0YJX3 145 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 ZBTB39O15060 712 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 WDR46O15213 610 aaKnown RBP4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 HNRNPRO43390 633 aaKnown RBP4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 GDF9O60383 454 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 GAS7O60861 476 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TNFAIP8O95379 198 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 GDF11O95390 407 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CLPTM1O96005 669 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 GH2P01242 217 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 C1QAP02745 245 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 INHBAP08476 426 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TMEM191BP0C7N4 346 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 SPATA31D3P0C874 917 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CDK4P11802 303 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 ETS1P14921 441 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 GARTP22102 1010 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 FDFT1P37268 417 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CPA2P48052 419 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CD151P48509 253 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 HSPA13P48723 471 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CD97P48960 835 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 SCNN1BP51168 640 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 NR1H2P55055 460 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 AQP4P55087 323 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CLDN10P78369 228 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 ZNF200P98182 395 aaPredicted RBP4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 FAAP100Q0VG06 881 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 BST1Q10588 318 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TCP10Q12799 353 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TMED1Q13445 227 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TUBB3Q13509 450 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 APOFQ13790 326 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CCNIQ14094 377 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 SPIDRQ14159 915 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 PIGHQ14442 188 aaPredicted RBP4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 LLGL1Q15334 1064 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 SNRNP35Q16560 246 aaKnown RBP4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TEX44Q53QW1 395 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TFDP3Q5H9I0 405 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 FNBP1LQ5T0N5 605 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 KLHDC10Q6PID8 442 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TIFABQ6ZNK6 161 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 RBM44Q6ZP01 1051 aaKnown RBP4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 SPATA31D4Q6ZUB0 917 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 NIPA1Q7RTP0 329 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TMC7Q7Z402 723 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 HAUS6Q7Z4H7 955 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 POLNQ7Z5Q5 900 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 PRPF39Q86UA1 669 aaKnown RBP4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 SLC26A11Q86WA9 606 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 TICAM1Q8IUC6 712 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 ANKMY2Q8IV38 441 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 WDR75Q8IWA0 830 aaKnown RBP4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 THNSL1Q8IYQ7 743 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 RNF168Q8IYW5 571 aaPredicted RBP4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 ABRAQ8N0Z2 381 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 BBS5Q8N3I7 341 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CCDC33Q8N5R6 958 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 SMYD1Q8NB12 490 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 ADCY4Q8NFM4 1077 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 CYP2W1Q8TAV3 490 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 GAB3Q8WWW8 586 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 KCNN1Q92952 543 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 NMD3Q96D46 503 aaKnown RBP4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 KCNK16Q96T55 309 aa4.33□□□□□ -1.72
PTP4A1-205ENST00000626021 INO80BQ9C086 356 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms