RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 CCDC130P13994 396 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 NDUFV2P19404 249 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 ATICP31939 592 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 TUBP50607 506 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 SIM1P81133 766 aaPredicted RBP11.7□□□□□ -0.54
DDX41-218ENST00000625286 TRPC3Q13507 836 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 BMT2Q1RMZ1 405 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 ANO4Q32M45 955 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 C1orf220Q5T0J3 134 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 C10orf76Q5T2E6 689 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 SCARA5Q6ZMJ2 495 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 STXBP4Q6ZWJ1 553 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 UNC13DQ70J99 1090 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 HTR3DQ70Z44 454 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 C12orf56Q8IXR9 622 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 GRAMD1CQ8IYS0 662 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 C12orf29Q8N999 325 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 PDZD8Q8NEN9 1154 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 PARD3BQ8TEW8 1205 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 OTUB2Q96DC9 234 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 SPACA7Q96KW9 195 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 CAMK1GQ96NX5 476 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 NMUR1Q9HB89 426 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 CSNK1G1Q9HCP0 422 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 DMAC2Q9NW81 257 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 DEC1Q9P2X7 70 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 SLC6A14Q9UN76 642 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 SH3BP1Q9Y3L3 701 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 RAD54BQ9Y620 910 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 FAM221BA6H8Z2 402 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 STX6O43752 255 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 KLRC4O43908 158 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 PPP6R2O75170 966 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 GJB3O75712 270 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 AP1G2O75843 785 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 CFIP05156 583 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 SERPINF2P08697 491 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 HOXB2P14652 356 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 NTSR1P30989 418 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 RPL6Q02878 288 aaKnown RBP11.69□□□□□ -0.54
DDX41-218ENST00000625286 ZNF33AQ06730 810 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 CUL4BQ13620 913 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 COL9A2Q14055 689 aaPredicted RBP11.69□□□□□ -0.54
DDX41-218ENST00000625286 STK38Q15208 465 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 DUOXA1Q1HG43 343 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 SPOPLQ6IQ16 392 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 CRYBG2Q8N1P7 616 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 CHCHD4Q8N4Q1 142 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 SLC2A14Q8TDB8 520 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 KCNV2Q8TDN2 545 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 SYAP1Q96A49 352 aaPredicted RBP11.69□□□□□ -0.54
DDX41-218ENST00000625286 TWNKQ96RR1 684 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 MED10Q9BTT4 135 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 GTPBP2Q9BX10 602 aaKnown RBP11.69□□□□□ -0.54
DDX41-218ENST00000625286 CUEDC2Q9H467 287 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 ZSCAN16Q9H4T2 348 aaPredicted RBP11.69□□□□□ -0.54
DDX41-218ENST00000625286 DMAP1Q9NPF5 467 aaPredicted RBP11.69□□□□□ -0.54
DDX41-218ENST00000625286 KRT82Q9NSB4 513 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 NUDT5Q9UKK9 219 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 MSRB2Q9Y3D2 182 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 NEUROG3Q9Y4Z2 214 aa11.69□□□□□ -0.54
DDX41-218ENST00000625286 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.68□□□□□ -0.54
DDX41-218ENST00000625286 NEDD8-MDP1E9PL57 170 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 MDM4O15151 490 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 POLR2DO15514 142 aaKnown RBP11.68□□□□□ -0.54
DDX41-218ENST00000625286 AP5Z1O43299 807 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 CACNG3O60359 315 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 TLR5O60602 858 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 TYRP14679 529 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 MAOBP27338 520 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 NDST1P52848 882 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 MAP3K7CLP57077 242 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 SNRPFP62306 86 aaKnown RBP11.68□□□□□ -0.54
DDX41-218ENST00000625286 RING1Q06587 406 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 STK4Q13043 487 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 NCOA4Q13772 614 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 KNOP1Q1ED39 458 aaKnown RBP11.68□□□□□ -0.54
DDX41-218ENST00000625286 ZNF699Q32M78 642 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 BTBD8Q5XKL5 378 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 TPGS1Q6ZTW0 290 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 MINDY1Q8N5J2 469 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 IQUBQ8NA54 791 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 IPO4Q8TEX9 1081 aaKnown RBP11.68□□□□□ -0.54
DDX41-218ENST00000625286 SMARCD1Q96GM5 515 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 ZNF419Q96HQ0 510 aaPredicted RBP11.68□□□□□ -0.54
DDX41-218ENST00000625286 INTS4Q96HW7 963 aaKnown RBP11.68□□□□□ -0.54
DDX41-218ENST00000625286 MRGPRX1Q96LB2 322 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 GABRG3Q99928 467 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 LRRC27Q9C0I9 530 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 FAM49BQ9NUQ9 324 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 DNAJC17Q9NVM6 304 aaKnown RBP11.68□□□□□ -0.54
DDX41-218ENST00000625286 COMMD8Q9NX08 183 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 MARK1Q9P0L2 795 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 FBXO10Q9UK96 956 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 CYP8B1Q9UNU6 501 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 CABIN1Q9Y6J0 2220 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 NUMA1Q14980 2115 aa11.68□□□□□ -0.54
DDX41-218ENST00000625286 UBE4BO95155 1302 aa11.67□□□□□ -0.54
DDX41-218ENST00000625286 TMEM8BA6NDV4 472 aa11.67□□□□□ -0.54
DDX41-218ENST00000625286 ARHGAP33O14559 1287 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms