RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TRAK2O60296 914 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 RFPL3O75679 317 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 UTP20O75691 2785 aaKnown RBP14.79□□□□□ -0.04
SNX1-214ENST00000625244 OXTRP30559 389 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 POLR2BP30876 1174 aaKnown RBP14.79□□□□□ -0.04
SNX1-214ENST00000625244 PNPLA4P41247 253 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 PSMC1P62191 440 aaKnown RBP14.79□□□□□ -0.04
SNX1-214ENST00000625244 ORC2Q13416 577 aaPredicted RBP14.79□□□□□ -0.04
SNX1-214ENST00000625244 FBXL19Q6PCT2 694 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 VSTM1Q6UX27 236 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 C4orf50Q6ZRC1 276 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 PRICKLE2Q7Z3G6 844 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 SNX19Q92543 992 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 TMEM131Q92545 1883 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 LGMNQ99538 433 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 AGAP1Q9UPQ3 857 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 STON1Q9Y6Q2 735 aa14.79□□□□□ -0.04
SNX1-214ENST00000625244 AHCTF1Q8WYP5 2266 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 NEDD8-MDP1E9PL57 170 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 COCHO43405 550 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 EIF5BO60841 1220 aaKnown RBP14.78□□□□□ -0.04
SNX1-214ENST00000625244 LMO2P25791 158 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 ANXA13P27216 316 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 PCSK1P29120 753 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 ADSSP30520 456 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 TMPRSS3P57727 454 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 NOP14P78316 857 aaKnown RBP14.78□□□□□ -0.04
SNX1-214ENST00000625244 INAVAQ3KP66 663 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 TTC38Q5R3I4 469 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 KRT79Q5XKE5 535 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 TMPRSS6Q8IU80 811 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 ADGRF2Q8IZF7 708 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 NECAB1Q8N987 351 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 MED8Q96G25 268 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 CEP295NLQ96MC4 621 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 MMTAG2Q9BU76 263 aaKnown RBP14.78□□□□□ -0.04
SNX1-214ENST00000625244 NUP58Q9BVL2 599 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 TM9SF3Q9HD45 589 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 CRTAC1Q9NQ79 661 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 NXF1Q9UBU9 619 aaKnown RBP14.78□□□□□ -0.04
SNX1-214ENST00000625244 SH3BP1Q9Y3L3 701 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 SNX9Q9Y5X1 595 aa14.78□□□□□ -0.04
SNX1-214ENST00000625244 NUMA1Q14980 2115 aa14.77□□□□□ -0.04
SNX1-214ENST00000625244 MYLKQ15746 1914 aa14.77□□□□□ -0.04
SNX1-214ENST00000625244 F8VP50 259 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 PAPSS1O43252 624 aaPredicted RBP14.77□□□□□ -0.05
SNX1-214ENST00000625244 CACNG3O60359 315 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 LDOC1O95751 146 aaPredicted RBP14.77□□□□□ -0.05
SNX1-214ENST00000625244 IGLV3-19P01714 112 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 ITGB3P05106 788 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 C1SP09871 688 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 CDK4P11802 303 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 LHX1P48742 406 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 ACADVLP49748 655 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 WNT7BP56706 349 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 GUCY1B3Q02153 619 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 TRIM29Q14134 588 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 STARD3Q14849 445 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 TEAD4Q15561 434 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 ADALQ6DHV7 355 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 CRELD2Q6UXH1 353 aaPredicted RBP14.77□□□□□ -0.05
SNX1-214ENST00000625244 FAM124AQ86V42 546 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 CACUL1Q86Y37 369 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 GATAD2AQ86YP4 633 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 C1orf127Q8N9H9 656 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 SYT2Q8N9I0 419 aaPredicted RBP14.77□□□□□ -0.05
SNX1-214ENST00000625244 SIPA1Q96FS4 1042 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 FAM84AQ96KN4 292 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 CNDP2Q96KP4 475 aaKnown RBP14.77□□□□□ -0.05
SNX1-214ENST00000625244 SYT15Q9BQS2 421 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 C6orf106Q9H6K1 298 aaPredicted RBP14.77□□□□□ -0.05
SNX1-214ENST00000625244 EHD2Q9NZN4 543 aa14.77□□□□□ -0.05
SNX1-214ENST00000625244 LARSQ9P2J5 1176 aaKnown RBP14.77□□□□□ -0.05
SNX1-214ENST00000625244 MYH11P35749 1972 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 ANKRD17O75179 2603 aaKnown RBP14.76□□□□□ -0.05
SNX1-214ENST00000625244 K7ENM7 598 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 JAK2O60674 1132 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 REC8O95072 547 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 CISD3P0C7P0 127 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 TYRP14679 529 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 PLCG1P19174 1290 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 CTSKP43235 329 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 GRIA4P48058 902 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 SLC12A3P55017 1021 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 CYP27A1Q02318 531 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 IFRD2Q12894 506 aaPredicted RBP14.76□□□□□ -0.05
SNX1-214ENST00000625244 ZRSR1Q15695 479 aaKnown RBP14.76□□□□□ -0.05
SNX1-214ENST00000625244 IL17AQ16552 155 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 SOWAHAQ2M3V2 549 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 ARSHQ5FYA8 562 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 TDRD10Q5VZ19 366 aaKnown RBP14.76□□□□□ -0.05
SNX1-214ENST00000625244 TOP6BLQ8N6T0 577 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 ZNF248Q8NDW4 579 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 NSUN7Q8NE18 718 aaKnown RBP14.76□□□□□ -0.05
SNX1-214ENST00000625244 CXorf38Q8TB03 319 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 XPO6Q96QU8 1125 aaKnown RBP14.76□□□□□ -0.05
SNX1-214ENST00000625244 DUSP9Q99956 384 aaKnown RBP14.76□□□□□ -0.05
SNX1-214ENST00000625244 BBS2Q9BXC9 721 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 GDAP2Q9NXN4 497 aa14.76□□□□□ -0.05
SNX1-214ENST00000625244 AGO2Q9UKV8 859 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms