RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 MAP7D3Q8IWC1 876 aa13.79□□□□□ -0.2
C3orf56-201ENST00000624688 CCDC185Q8N715 623 aa13.79□□□□□ -0.2
C3orf56-201ENST00000624688 PLD5Q8N7P1 536 aa13.79□□□□□ -0.2
C3orf56-201ENST00000624688 PCDH19Q8TAB3 1148 aa13.79□□□□□ -0.2
C3orf56-201ENST00000624688 MYLPFQ96A32 169 aa13.79□□□□□ -0.2
C3orf56-201ENST00000624688 SLC2A13Q96QE2 648 aa13.79□□□□□ -0.2
C3orf56-201ENST00000624688 ACBD6Q9BR61 282 aa13.79□□□□□ -0.2
C3orf56-201ENST00000624688 RHOBTB2Q9BYZ6 727 aa13.79□□□□□ -0.2
C3orf56-201ENST00000624688 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.79□□□□□ -0.2
C3orf56-201ENST00000624688 TSPYL1Q9H0U9 437 aa13.79□□□□□ -0.2
C3orf56-201ENST00000624688 TMLHEQ9NVH6 421 aa13.79□□□□□ -0.2
C3orf56-201ENST00000624688 TPX2Q9ULW0 747 aaKnown RBP13.79□□□□□ -0.2
C3orf56-201ENST00000624688 ZNF487B1APH4 448 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 SHOX2O60902 331 aaPredicted RBP13.78□□□□□ -0.2
C3orf56-201ENST00000624688 IFNB1P01574 187 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 FYNP06241 537 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 RBP3P10745 1247 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 PAX3P23760 479 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 SULT1E1P49888 294 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 DSC1Q08554 894 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 IFFO1Q0D2I5 559 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 GPNMBQ14956 572 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 KRT71Q3SY84 523 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 DNAJC21Q5F1R6 531 aaKnown RBP13.78□□□□□ -0.2
C3orf56-201ENST00000624688 INTS6LQ5JSJ4 861 aaKnown RBP13.78□□□□□ -0.2
C3orf56-201ENST00000624688 C1orf228Q6PIY5 440 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 KDM7AQ6ZMT4 941 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 METTL23Q86XA0 190 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 ZCCHC9Q8N567 271 aaKnown RBP13.78□□□□□ -0.2
C3orf56-201ENST00000624688 OR10T2Q8NGX3 314 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 UHMK1Q8TAS1 419 aaKnown RBP13.78□□□□□ -0.2
C3orf56-201ENST00000624688 SH3TC2Q8TF17 1288 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 FAM149B1Q96BN6 582 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 SUSD3Q96L08 255 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 TMEM209Q96SK2 561 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 NPY6RQ99463 290 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 ZNF670Q9BS34 389 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 TMEM109Q9BVC6 243 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 ULBP1Q9BZM6 244 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 CENPHQ9H3R5 247 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 CSNK1G1Q9HCP0 422 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 DSEQ9UL01 958 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 DNAH12Q6ZR08 3092 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 KBTBD13C9JR72 458 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 APOL1O14791 398 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 MCF2LO15068 1137 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 TTC4O95801 387 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 TGM2P21980 687 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 YY1P25490 414 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 NOS2P35228 1153 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 RPL22P35268 128 aaKnown RBP13.78□□□□□ -0.2
C3orf56-201ENST00000624688 DAOAP59103 153 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 ARHGEF6Q15052 776 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 SYPL2Q5VXT5 272 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 B4GALNT4Q76KP1 1039 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 LRRC8DQ7L1W4 858 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 ZNF771Q7L3S4 317 aaPredicted RBP13.78□□□□□ -0.2
C3orf56-201ENST00000624688 LRRTM3Q86VH5 581 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 SIX6OS1Q8N1H7 587 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 P3H4Q92791 437 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 SMARCD1Q96GM5 515 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 KCTD15Q96SI1 283 aaPredicted RBP13.78□□□□□ -0.2
C3orf56-201ENST00000624688 FOXP3Q9BZS1 431 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 NINJ2Q9NZG7 142 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 FZD10Q9ULW2 581 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 AP4E1Q9UPM8 1137 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 FARP1Q9Y4F1 1045 aaPredicted RBP13.78□□□□□ -0.2
C3orf56-201ENST00000624688 NLRC5Q86WI3 1866 aa13.78□□□□□ -0.2
C3orf56-201ENST00000624688 COL4A4P53420 1690 aaPredicted RBP13.77□□□□□ -0.2
C3orf56-201ENST00000624688 YJEFN3A6XGL0 299 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 E7ENQ6 273 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 NBNO60934 754 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 FBXO21O94952 628 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 SELPP16109 830 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 NR1D1P20393 614 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 CYP2F1P24903 491 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 MORF4L2Q15014 288 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 KYNUQ16719 465 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 PPP6R3Q5H9R7 873 aaPredicted RBP13.77□□□□□ -0.21
C3orf56-201ENST00000624688 BHLHA9Q7RTU4 235 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 CTU1Q7Z7A3 348 aaKnown RBP13.77□□□□□ -0.21
C3orf56-201ENST00000624688 FAM126BQ8IXS8 530 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 COLGALT2Q8IYK4 626 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 FAM71DQ8N9W8 422 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.77□□□□□ -0.21
C3orf56-201ENST00000624688 RSAD2Q8WXG1 361 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 PRCCQ92733 491 aaPredicted RBP13.77□□□□□ -0.21
C3orf56-201ENST00000624688 TLCD1Q96CP7 247 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 UNC93B1Q9H1C4 597 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 DHX35Q9H5Z1 703 aaKnown RBP13.77□□□□□ -0.21
C3orf56-201ENST00000624688 NRDE2Q9H7Z3 1164 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 POPDC2Q9HBU9 364 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 SAGE1Q9NXZ1 904 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 NOVA2Q9UNW9 492 aaKnown RBP13.77□□□□□ -0.21
C3orf56-201ENST00000624688 NAALADL1Q9UQQ1 740 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 TRIM17Q9Y577 477 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 USP3Q9Y6I4 520 aa13.77□□□□□ -0.21
C3orf56-201ENST00000624688 DCDC2CA8MYV0 355 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms