RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 ORC1Q13415 861 aa25.14■■□□□ 1.62
CPSF1-214ENST00000622776 ZACNQ401N2 412 aa25.14■■□□□ 1.62
CPSF1-214ENST00000622776 HTR3DQ70Z44 454 aa25.14■■□□□ 1.62
CPSF1-214ENST00000622776 CEP57L1Q8IYX8 460 aa25.14■■□□□ 1.62
CPSF1-214ENST00000622776 KIAA0895Q8NCT3 520 aa25.14■■□□□ 1.62
CPSF1-214ENST00000622776 DEFB124Q8NES8 71 aa25.14■■□□□ 1.62
CPSF1-214ENST00000622776 KLF16Q9BXK1 252 aaPredicted RBP25.14■■□□□ 1.62
CPSF1-214ENST00000622776 TLR8Q9NR97 1041 aaKnown RBP25.14■■□□□ 1.62
CPSF1-214ENST00000622776 HMGXB4Q9UGU5 601 aa25.14■■□□□ 1.62
CPSF1-214ENST00000622776 PILRBQ9UKJ0 227 aa25.14■■□□□ 1.62
CPSF1-214ENST00000622776 TNRC6BQ9UPQ9 1833 aaKnown RBP25.14■■□□□ 1.61
CPSF1-214ENST00000622776 ZFYVE26Q68DK2 2539 aa25.14■■□□□ 1.61
CPSF1-214ENST00000622776 C1QTNF9BB2RNN3 333 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 GREM1O60565 184 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 TBX18O95935 607 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 C1QTNF9P0C862 333 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 HOXB2P14652 356 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 GABRG2P18507 467 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 ITPKAP23677 461 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 NTSR1P30989 418 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 WASP42768 502 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 MAPK8P45983 427 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 GRAMD4Q6IC98 578 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 SLC23A3Q6PIS1 610 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 UNQ6494/PRO21346Q6UXR6 183 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 UNC93AQ86WB7 457 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 MIB1Q86YT6 1006 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 TMEM174Q8WUU8 243 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 TAF4BQ92750 862 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 FAM49BQ9NUQ9 324 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 EXOC1Q9NV70 894 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 SERTAD1Q9UHV2 236 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 STARD13Q9Y3M8 1113 aa25.13■■□□□ 1.61
CPSF1-214ENST00000622776 ATXN2Q99700 1313 aaKnown RBP25.12■■□□□ 1.61
CPSF1-214ENST00000622776 SLFN14P0C7P3 912 aa25.12■■□□□ 1.61
CPSF1-214ENST00000622776 ZSCAN22P10073 491 aaPredicted RBP25.12■■□□□ 1.61
CPSF1-214ENST00000622776 ENGP17813 658 aa25.12■■□□□ 1.61
CPSF1-214ENST00000622776 SPINK2P20155 84 aa25.12■■□□□ 1.61
CPSF1-214ENST00000622776 PEAR1Q5VY43 1037 aaPredicted RBP25.12■■□□□ 1.61
CPSF1-214ENST00000622776 SV2AQ7L0J3 742 aa25.12■■□□□ 1.61
CPSF1-214ENST00000622776 C12orf29Q8N999 325 aa25.12■■□□□ 1.61
CPSF1-214ENST00000622776 TMC2Q8TDI7 906 aa25.12■■□□□ 1.61
CPSF1-214ENST00000622776 BACH2Q9BYV9 841 aa25.12■■□□□ 1.61
CPSF1-214ENST00000622776 KCTD10Q9H3F6 313 aa25.12■■□□□ 1.61
CPSF1-214ENST00000622776 DNAJC17Q9NVM6 304 aaKnown RBP25.12■■□□□ 1.61
CPSF1-214ENST00000622776 AP5Z1O43299 807 aa25.11■■□□□ 1.61
CPSF1-214ENST00000622776 TOP3BO95985 862 aaKnown RBP25.11■■□□□ 1.61
CPSF1-214ENST00000622776 F13A1P00488 732 aa25.11■■□□□ 1.61
CPSF1-214ENST00000622776 ASS1P00966 412 aaKnown RBP25.11■■□□□ 1.61
CPSF1-214ENST00000622776 HOXD12P35452 270 aa25.11■■□□□ 1.61
CPSF1-214ENST00000622776 ATP5C1P36542 298 aaKnown RBP25.11■■□□□ 1.61
CPSF1-214ENST00000622776 RPL6Q02878 288 aaKnown RBP25.11■■□□□ 1.61
CPSF1-214ENST00000622776 EGFLAMQ63HQ2 1017 aa25.11■■□□□ 1.61
CPSF1-214ENST00000622776 SPOPLQ6IQ16 392 aa25.11■■□□□ 1.61
CPSF1-214ENST00000622776 SLC36A4Q6YBV0 504 aa25.11■■□□□ 1.61
CPSF1-214ENST00000622776 XPO6Q96QU8 1125 aaKnown RBP25.11■■□□□ 1.61
CPSF1-214ENST00000622776 BBS2Q9BXC9 721 aa25.11■■□□□ 1.61
CPSF1-214ENST00000622776 CYLDQ9NQC7 956 aa25.11■■□□□ 1.61
CPSF1-214ENST00000622776 CALCOCO1Q9P1Z2 691 aa25.11■■□□□ 1.61
CPSF1-214ENST00000622776 WDR35Q9P2L0 1181 aa25.11■■□□□ 1.61
CPSF1-214ENST00000622776 A0A1W2PQF6 199 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 NEDD8-MDP1E9PL57 170 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 PDXKO00764 312 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 ACTN4O43707 911 aaKnown RBP25.1■■□□□ 1.61
CPSF1-214ENST00000622776 CACNG3O60359 315 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 NR3C1P04150 777 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 CFIP05156 583 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 FAM200BP0CF97 657 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 PDIA4P13667 645 aaKnown RBP25.1■■□□□ 1.61
CPSF1-214ENST00000622776 ADORA2BP29275 332 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 ASPAP45381 313 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 KMT5BQ4FZB7 885 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 ATL3Q6DD88 541 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 GPRIN1Q7Z2K8 1008 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 DEFB119Q8N690 84 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 PAGE5Q96GU1 130 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 ACOX2Q99424 681 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 OSER1Q9NX31 292 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 LSM7Q9UK45 103 aaKnown RBP25.1■■□□□ 1.61
CPSF1-214ENST00000622776 SLC6A14Q9UN76 642 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 SCML2Q9UQR0 700 aa25.1■■□□□ 1.61
CPSF1-214ENST00000622776 IKBKBO14920 756 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 ZBTB24O43167 697 aaPredicted RBP25.09■■□□□ 1.61
CPSF1-214ENST00000622776 HLA-DRAP01903 254 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 TYRP14679 529 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 GOLGA8FQ08AF8 430 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 GOLGA8DPQ0D2H9 430 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 DUOXA1Q1HG43 343 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 C1orf220Q5T0J3 134 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 TPGS1Q6ZTW0 290 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 CLEC20AQ6ZU45 233 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 CHPFQ8IZ52 775 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 CEP76Q8TAP6 659 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 SNX21Q969T3 373 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 HNRNPABQ99729 332 aaKnown RBP25.09■■□□□ 1.61
CPSF1-214ENST00000622776 ADAM33Q9BZ11 813 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 SLC32A1Q9H598 525 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 MARK1Q9P0L2 795 aa25.09■■□□□ 1.61
CPSF1-214ENST00000622776 CEP192Q8TEP8 1941 aa25.08■■□□□ 1.61
CPSF1-214ENST00000622776 AKAP13Q12802 2813 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms