RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TGFB1I1O43294 461 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 OPA1O60313 960 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 CST3P01034 146 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-229ENST00000622668 POU5F1BQ06416 359 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 CNGA2Q16280 664 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 NFIL3Q16649 462 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 SHDQ96IW2 340 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 ERGIC2Q96RQ1 377 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 TSPAN18Q96SJ8 248 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 TRIM56Q9BRZ2 755 aaKnown RBP9.43□□□□□ -0.9
HDAC9-229ENST00000622668 C17orf80Q9BSJ5 609 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 WNT8AQ9H1J5 351 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.43□□□□□ -0.9
HDAC9-229ENST00000622668 OGDHLQ9ULD0 1010 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 PKP3Q9Y446 797 aa9.43□□□□□ -0.9
HDAC9-229ENST00000622668 RB1P06400 928 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 CSE1LP55060 971 aaKnown RBP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 SEC13P55735 322 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 MRPS25P82663 173 aaKnown RBP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 GRSF1Q12849 480 aaKnown RBP eCLIP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 GPS1Q13098 491 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 FRA10AC1Q70Z53 315 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 EMID1Q96A84 441 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 BTBD6Q96KE9 485 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 HSFY1Q96LI6 401 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 RUNDC3BQ96NL0 473 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 EGFL8Q99944 293 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 THAP2Q9H0W7 228 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 GOLPH3Q9H4A6 298 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 NSUN3Q9H649 340 aaKnown RBP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 NT5MQ9NPB1 228 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 YIPF1Q9Y548 306 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 N4BP2Q86UW6 1770 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 NUP188Q5SRE5 1749 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 GOLGA6L7A0A1B0GV03 622 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 PDZK1P1A8MUH7 402 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 NCK2O43639 380 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 LSM8O95777 96 aaKnown RBP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 JCHAINP01591 159 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 MTM1Q13496 603 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 MAP7D1Q3KQU3 841 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 HP1BP3Q5SSJ5 553 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 HYIQ5T013 277 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 PPP1R26Q5T8A7 1209 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 FAM126BQ8IXS8 530 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 TMEM175Q9BSA9 504 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 RAB6BQ9NRW1 208 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 A8MX80 341 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 DNTTP04053 509 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 SOD2P04179 222 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 TUBBP07437 444 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 NPY5RQ15761 445 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 CMTR2Q8IYT2 770 aaKnown RBP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 RAB42Q8N4Z0 105 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 MYCBPAPQ8TBZ2 947 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 USP13Q92995 863 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 ACBD6Q9BR61 282 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 GPR88Q9GZN0 384 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 KAT6AQ92794 2004 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 TOGARAM1Q9Y4F4 1720 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 SCN9AQ15858 1988 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 SSU72P8A0A1W2PR75 194 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 EPHX1P07099 455 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 CTSEP14091 401 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 COMTP21964 271 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 DGKEP52429 567 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 SLC5A3P53794 718 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 SLC6A3Q01959 620 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 PDCLQ13371 301 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 TPGS2Q68CL5 300 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 ERAP2Q6P179 960 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 DENND1BQ6P3S1 775 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 RAB44Q7Z6P3 723 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 TTC7BQ86TV6 843 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 SLC22A17Q8WUG5 538 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 ATRIPQ8WXE1 791 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 FBXL18Q96ME1 805 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 OXCT2Q9BYC2 517 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-229ENST00000622668 FGFBP2Q9BYJ0 223 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 SCUBE2Q9NQ36 999 aa9.42□□□□□ -0.9
HDAC9-229ENST00000622668 ABCA3Q99758 1704 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 A0A087X0T9 212 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 SYF2O95926 243 aaKnown RBP9.41□□□□□ -0.9
HDAC9-229ENST00000622668 FAM228BP0C875 321 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 CYP3A5P20815 502 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 DR1Q01658 176 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 FAAP100Q0VG06 881 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 MTF1Q14872 753 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 NAB2Q15742 525 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 WHAMMP3Q1A5X7 153 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 ZRANB3Q5FWF4 1079 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 FOXR1Q6PIV2 292 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 DNAAF5Q86Y56 855 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 ELOA2Q8IYF1 753 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-229ENST00000622668 RCOR2Q8IZ40 523 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 COLGALT1Q8NBJ5 622 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 PCED1BQ96HM7 432 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 OSBPL8Q9BZF1 889 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 NR2E1Q9Y466 385 aa9.41□□□□□ -0.9
HDAC9-229ENST00000622668 MARF1Q9Y4F3 1742 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms