RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 IL1BP01584 269 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 GSTA2P09210 222 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 ADRA1DP25100 572 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 GBP2P32456 591 aaPredicted RBP9.81□□□□□ -0.84
PDPN-212ENST00000621990 ATP5OP48047 213 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 BCAR1P56945 870 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 CA9Q16790 459 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 KIZQ2M2Z5 673 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 C9orf57Q5W0N0 161 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 NOTUMQ6P988 496 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 CAND1Q86VP6 1230 aaKnown RBP9.81□□□□□ -0.84
PDPN-212ENST00000621990 SCUBE3Q8IX30 993 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 CRYBG2Q8N1P7 616 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 BEST2Q8NFU1 509 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 LRRC39Q96DD0 335 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 MAML3Q96JK9 1138 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 TSPAN18Q96SJ8 248 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 GCOM2Q9BZD3 368 aaPredicted RBP9.81□□□□□ -0.84
PDPN-212ENST00000621990 MYLK2Q9H1R3 596 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 NRDE2Q9H7Z3 1164 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 POPDC2Q9HBU9 364 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 NGRNQ9NPE2 291 aaKnown RBP9.81□□□□□ -0.84
PDPN-212ENST00000621990 RAB6BQ9NRW1 208 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 HESX1Q9UBX0 185 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 GJD2Q9UKL4 321 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 TTLL3Q9Y4R7 772 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 PIRO00625 290 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 TRDMT1O14717 391 aaKnown RBP9.8□□□□□ -0.84
PDPN-212ENST00000621990 KCNN4O15554 427 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 GCATO75600 419 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 DESP17661 470 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 PRKCHP24723 683 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 RBL1P28749 1068 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 L1CAMP32004 1257 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 NR2C2P49116 596 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 PTK7Q13308 1070 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 KBTBD12Q3ZCT8 623 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 XKR4Q5GH76 650 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 IQSEC1Q6DN90 963 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 TAB3Q8N5C8 712 aaPredicted RBP9.8□□□□□ -0.84
PDPN-212ENST00000621990 ANKRD52Q8NB46 1076 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 KBTBD7Q8WVZ9 684 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 MRRFQ96E11 262 aaKnown RBP9.8□□□□□ -0.84
PDPN-212ENST00000621990 SLC10A4Q96EP9 437 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 APOPT1Q96IL0 206 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 LRRC37BQ96QE4 947 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 EIF2AQ9BY44 585 aaKnown RBP9.8□□□□□ -0.84
PDPN-212ENST00000621990 ADAM33Q9BZ11 813 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 LRMDAQ9H2I8 198 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 ABHD16BQ9H3Z7 469 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 TXLNGQ9NUQ3 528 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 ETNK2Q9NVF9 386 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 GDAP2Q9NXN4 497 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 VGLL3A8MV65 326 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 BTBD19C9JJ37 291 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 C2CD2LO14523 706 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 ADCY6O43306 1168 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 PIAS1O75925 651 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 KRT16P08779 473 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 ZFXP17010 805 aaPredicted RBP9.8□□□□□ -0.84
PDPN-212ENST00000621990 ALDH3A1P30838 453 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 BST2Q10589 180 aaKnown RBP9.8□□□□□ -0.84
PDPN-212ENST00000621990 SETDB1Q15047 1291 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 SLC45A4Q5BKX6 768 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 C9orf131Q5VYM1 1079 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 GPR142Q7Z601 462 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 ANKRD23Q86SG2 305 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 APBB2Q92870 758 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 C18orf25Q96B23 403 aaPredicted RBP9.8□□□□□ -0.84
PDPN-212ENST00000621990 SERAC1Q96JX3 654 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 TACO1Q9BSH4 297 aaKnown RBP9.8□□□□□ -0.84
PDPN-212ENST00000621990 B3GNT5Q9BYG0 378 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 KLC2Q9H0B6 622 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 FAM49BQ9NUQ9 324 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 SETD4Q9NVD3 440 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 GPATCH2LQ9NWQ4 482 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 MTMR10Q9NXD2 777 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 SLC17A7Q9P2U7 560 aa9.8□□□□□ -0.84
PDPN-212ENST00000621990 SMIM35A0A1B0GVV1 85 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 A6NJR5 290 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 AVILO75366 819 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 ZBED1O96006 694 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 F2P00734 622 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 MT-ND3P03897 115 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 DARSP14868 501 aaKnown RBP9.79□□□□□ -0.84
PDPN-212ENST00000621990 TFE3P19532 575 aaPredicted RBP9.79□□□□□ -0.84
PDPN-212ENST00000621990 TPSB2P20231 275 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 AXLP30530 894 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 BCAT1P54687 386 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 MTM1Q13496 603 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 IRF5Q13568 498 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 TPSAB1Q15661 275 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 PARP6Q2NL67 630 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 SCYL2Q6P3W7 929 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 ZNF534Q76KX8 674 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 SLC26A11Q86WA9 606 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 CDKL3Q8IVW4 592 aaPredicted RBP9.79□□□□□ -0.84
PDPN-212ENST00000621990 OR6J1Q8NGC5 347 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 ERP27Q96DN0 273 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 TMEM237Q96Q45 408 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms