RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 YBX3P16989 372 aaKnown RBP eCLIP9.55□□□□□ -0.884e-6■□□□□ 8.3
GGA3-223ENST00000621870 DDX39BQ13838 428 aaKnown RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 PTK6Q13882 451 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 MTFR1Q15390 333 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 USP41Q3LFD5 358 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 ZACNQ401N2 412 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 FSCBQ5H9T9 825 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 MRNIPQ6NTE8 343 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 LLGL2Q6P1M3 1020 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 SPOCD1Q6ZMY3 1216 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 C16orf59Q7L2K0 433 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 C12orf29Q8N999 325 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 B3GALNT2Q8NCR0 500 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 CLEC4DQ8WXI8 215 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 ATP6V1G3Q96LB4 118 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 PNKPQ96T60 521 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 FUCA2Q9BTY2 467 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 UXTQ9UBK9 157 aaPredicted RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 L3MBTL1Q9Y468 752 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 ZMYM2Q9UBW7 1377 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 HEATR9A2RTY3 570 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 ADCY6O43306 1168 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 SNRPAP09012 282 aaKnown RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 ACADMP11310 421 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 TUSC3Q13454 348 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 SLC29A2Q14542 456 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 PSMD5Q16401 504 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 NT5DC1Q5TFE4 455 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 TIGD7Q6NT04 549 aaPredicted RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 CCNI2Q6ZMN8 369 aaPredicted RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 TRMT10CQ7L0Y3 403 aaKnown RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 REXO1L1PQ8IX06 675 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 GPR152Q8TDT2 470 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 C18orf25Q96B23 403 aaPredicted RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 IL17RAQ96F46 866 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 TKTL2Q9H0I9 626 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 ASTN1O14525 1302 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 MYO7AQ13402 2215 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 KLRG2A4D1S0 409 aaPredicted RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 O00370 1275 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 TRUB2O95900 331 aaKnown RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 SELPP16109 830 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 NPR3P17342 541 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 MIPP30301 263 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 IFNA8P32881 189 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 NDUFV1P49821 464 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 SLC6A3Q01959 620 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 C15orf59Q2T9L4 293 aaPredicted RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 ZC3H12AQ5D1E8 599 aaKnown RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 ARSHQ5FYA8 562 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 ERMARDQ5T6L9 678 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 DENND1BQ6P3S1 775 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 CCDC149Q6ZUS6 474 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 ANKS3Q6ZW76 656 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 SLC24A5Q71RS6 500 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 EXD1Q8NHP7 514 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 TXLNGQ9NUQ3 528 aa9.55□□□□□ -0.88
GGA3-223ENST00000621870 DDX20Q9UHI6 824 aaKnown RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 AAR2Q9Y312 384 aaKnown RBP9.55□□□□□ -0.88
GGA3-223ENST00000621870 TARSL2A2RTX5 802 aaKnown RBP9.54□□□□□ -0.88
GGA3-223ENST00000621870 SUPT3HB4E1H0 165 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 SUPT3HO75486 399 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 KRT4P19013 534 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 BMP6P22004 513 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 PPM1AP35813 382 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 FNTAP49354 379 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 HIRAP54198 1017 aaPredicted RBP9.54□□□□□ -0.88
GGA3-223ENST00000621870 MDM2Q00987 491 aaPredicted RBP9.54□□□□□ -0.88
GGA3-223ENST00000621870 MCL1Q07820 350 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 CNGA2Q16280 664 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 MFSD7Q6UXD7 560 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 RD3Q7Z3Z2 195 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 NT5DC3Q86UY8 548 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 UNC93AQ86WB7 457 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 SLC26A7Q8TE54 656 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 EPS8L1Q8TE68 723 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 SERPINI1Q99574 410 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 TSSK1BQ9BXA7 367 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 POPDC2Q9HBU9 364 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 SCUBE2Q9NQ36 999 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 ASAH2Q9NR71 780 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 PIH1D1Q9NWS0 290 aaKnown RBP9.54□□□□□ -0.88
GGA3-223ENST00000621870 RRN3Q9NYV6 651 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 PSMC3IPQ9P2W1 217 aaPredicted RBP9.54□□□□□ -0.88
GGA3-223ENST00000621870 C2CD2Q9Y426 696 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 TRIM49D1C9J1S8 452 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 CLDN5O00501 218 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 GYG2O15488 501 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 FDFT1P37268 417 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 SERPINB9P50453 376 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 DDR2Q16832 855 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 TTLL9Q3SXZ7 439 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 PLPP4Q5VZY2 271 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 ARMC6Q6NXE6 501 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 LRRC55Q6ZSA7 311 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 C7orf61Q8IZ16 206 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 ATAD1Q8NBU5 361 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 FBXO25Q8TCJ0 367 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 C12orf42Q96LP6 360 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 CDK5RAP1Q96SZ6 601 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms