RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 NR2E1Q9Y466 385 aa19.44■□□□□ 0.7
SEMA6C-210ENST00000621728 PLXNA3P51805 1871 aa19.44■□□□□ 0.7
SEMA6C-210ENST00000621728 LAMA3Q16787 3333 aa19.44■□□□□ 0.7
SEMA6C-210ENST00000621728 TEX28O15482 410 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 TRUB2O95900 331 aaKnown RBP19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 KRT1P04264 644 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 CA3P07451 260 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 PAFAH1B1P43034 410 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 PTPN9P43378 593 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 ERVFC1P60507 584 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 ZFYVE27Q5T4F4 411 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 ARCQ7LC44 396 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 SCD5Q86SK9 330 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 NUP93Q8N1F7 819 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 ACTRT1Q8TDG2 376 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 RAPGEF5Q92565 580 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 NMUR1Q9HB89 426 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 GPATCH2LQ9NWQ4 482 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 RAB21Q9UL25 225 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 USP18Q9UMW8 372 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 PGRMC1O00264 195 aaKnown RBP19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 ABLIM3O94929 683 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 SPATA31D3P0C874 917 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 CTSAP10619 480 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 NCAM1P13591 858 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 KCTD19Q17RG1 926 aaPredicted RBP19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 BSPRYQ5W0U4 402 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 SPATA31D4Q6ZUB0 917 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 KATNAL2Q8IYT4 538 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 SPATA4Q8NEY3 305 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 ZNF461Q8TAF7 563 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 C2orf15Q8WU43 125 aaKnown RBP19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 PARD6BQ9BYG5 372 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 EPC1Q9H2F5 836 aa19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 RBM12Q9NTZ6 932 aaKnown RBP19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 AFF4Q9UHB7 1163 aaKnown RBP19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 COL4A4P53420 1690 aaPredicted RBP19.43■□□□□ 0.7
SEMA6C-210ENST00000621728 TNRC18O15417 2968 aaPredicted RBP19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 CARNS1A5YM72 827 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 CAPN9O14815 690 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 ERLIN1O75477 346 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 GLI1P08151 1106 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 CNPP09543 421 aaKnown RBP19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 NOS2P35228 1153 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 PBX2P40425 430 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 SMARCB1Q12824 385 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 ACAP1Q15027 740 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 SLC25A52Q3SY17 297 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 SEL1L2Q5TEA6 688 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 ZNF572Q7Z3I7 529 aaPredicted RBP19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 TMC7Q7Z402 723 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 CCDC50Q8IVM0 306 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 ZDHHC14Q8IZN3 488 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 IRGQQ8WZA9 623 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 HSPH1Q92598 858 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 CENPIQ92674 756 aaPredicted RBP19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 NPY6RQ99463 290 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 MAGEB5Q9BZ81 275 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 CYP4F11Q9HBI6 524 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 OSER1Q9NX31 292 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 NUDT5Q9UKK9 219 aa19.42■□□□□ 0.7
SEMA6C-210ENST00000621728 A0A1W2PQH9 124 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 SART1O43290 800 aaKnown RBP19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 CXCL14O95715 111 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 CD48P09326 243 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 RARAP10276 462 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 PCK1P35558 622 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 YWHAGP61981 247 aaKnown RBP eCLIP19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 MRPS25P82663 173 aaKnown RBP19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 RAB33AQ14088 237 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 LONRF2Q1L5Z9 754 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 LRRC38Q5VT99 294 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 MFSD7Q6UXD7 560 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 TNS4Q8IZW8 715 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 SLC7A14Q8TBB6 771 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 HEMGNQ9BXL5 484 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 GMIPQ9P107 970 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 YBX2Q9Y2T7 364 aaKnown RBP19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 M0QYT0 321 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 ATF2P15336 505 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 MCM3P25205 808 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 NME3Q13232 169 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 HADHQ16836 314 aaKnown RBP19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 PLPP4Q5VZY2 271 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 DENND5BQ6ZUT9 1274 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 SCML4Q8N228 414 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 SPPL3Q8TCT6 385 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 NT5C3BQ969T7 300 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 TCF25Q9BQ70 676 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 TMPRSS4Q9NRS4 437 aa19.41■□□□□ 0.7
SEMA6C-210ENST00000621728 LRRD1A4D1F6 860 aa19.4■□□□□ 0.7
SEMA6C-210ENST00000621728 SLC38A8A6NNN8 435 aa19.4■□□□□ 0.7
SEMA6C-210ENST00000621728 HIDE1A8MVS5 230 aa19.4■□□□□ 0.7
SEMA6C-210ENST00000621728 DMTNQ08495 405 aa19.4■□□□□ 0.7
SEMA6C-210ENST00000621728 SMC1AQ14683 1233 aaKnown RBP19.4■□□□□ 0.7
SEMA6C-210ENST00000621728 CA9Q16790 459 aa19.4■□□□□ 0.7
SEMA6C-210ENST00000621728 ZC3H12AQ5D1E8 599 aaKnown RBP19.4■□□□□ 0.7
SEMA6C-210ENST00000621728 FAM131BQ86XD5 332 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms