RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 IFT122Q9HBG6 1241 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 LTBP3Q9NS15 1303 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 E5RJQ4 531 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 APOL1O14791 398 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 AVILO75366 819 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 CD48P09326 243 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 PRKAR2AP13861 404 aaKnown RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 ACADSP16219 412 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 NCF2P19878 526 aaPredicted RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 GPD1P21695 349 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 EEF1DP29692 281 aaKnown RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 PEX5P50542 639 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 TSPY1Q01534 308 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 MED21Q13503 144 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 EFTUD2Q15029 972 aaKnown RBP eCLIP9.42□□□□□ -0.92e-6■■■■□ 20.3
GGA3-222ENST00000621217 FBXO47Q5MNV8 452 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 ZDHHC24Q6UX98 284 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 PID1Q7Z2X4 250 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 FAM172AQ8WUF8 416 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 TFAP2BQ92481 460 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 PRCCQ92733 491 aaPredicted RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 EIF2AQ9BY44 585 aaKnown RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 ZC4H2Q9NQZ6 224 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 TRIM17Q9Y577 477 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 RPTORQ8N122 1335 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 CITO14578 2027 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 KRT37O76014 449 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 C4BPAP04003 597 aaKnown RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 NCAM1P13591 858 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 SULT1E1P49888 294 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 SCNN1GP51170 649 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 KDSRQ06136 332 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 FAM110CQ1W6H9 321 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 DUSP28Q4G0W2 176 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 SLC27A1Q6PCB7 646 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 RNF180Q86T96 592 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 AFAP1L2Q8N4X5 818 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 APOL2Q9BQE5 337 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 ROPN1BQ9BZX4 212 aaPredicted RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 ROPN1Q9HAT0 212 aaPredicted RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 PALMDQ9NP74 551 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 PSMC3IPQ9P2W1 217 aaPredicted RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 EPS15L1Q9UBC2 864 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 PHTF1Q9UMS5 762 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 UBQLN1Q9UMX0 589 aaKnown RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 C15orf41Q9Y2V0 281 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 MAGEA13PA6NCF6 341 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 FSCN2O14926 492 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 VNN1O95497 513 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 GSTA1P08263 222 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 CDC25CP30307 473 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 PTGIRP43119 386 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 C1QBPQ07021 282 aaKnown RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 C1orf146Q5VVC0 180 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 IL31Q6EBC2 164 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 GLB1LQ6UWU2 654 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 SLC2A14Q8TDB8 520 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 LZICQ8WZA0 190 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 NDRG1Q92597 394 aaKnown RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 TMEM59LQ9UK28 342 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 SCN7AQ01118 1682 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 SRRM3A6NNA2 597 aaPredicted RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 TRIM49D1C9J1S8 452 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 MICAL2O94851 1124 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 ATP6V1G2O95670 118 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 ELK3P41970 407 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 ARFIP2P53365 341 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 VCPP55072 806 aaKnown RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 CRHR2Q13324 411 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 CNGA2Q16280 664 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 PTPN20Q4JDL3 420 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 NOL9Q5SY16 702 aaKnown RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 PPP1R2P3Q6NXS1 205 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 C4orf50Q6ZRC1 276 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 SYDE1Q6ZW31 735 aaPredicted RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 PLPPR4Q7Z2D5 763 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 ZNF572Q7Z3I7 529 aaPredicted RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 RASSF3Q86WH2 238 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 RNF217Q8TC41 542 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 KAT2BQ92831 832 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 ART4Q93070 314 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 FAM161BQ96MY7 647 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 PAFAH2Q99487 392 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 SEPT5Q99719 369 aaPredicted RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 HAUS8Q9BT25 410 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 EFHD1Q9BUP0 239 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 B3GNT5Q9BYG0 378 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.41□□□□□ -0.94e-11■■■■□ 24.4
GGA3-222ENST00000621217 TUBGCP4Q9UGJ1 667 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 NR2E3Q9Y5X4 410 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 CDY2AQ9Y6F7 541 aa9.41□□□□□ -0.9
GGA3-222ENST00000621217 DDX60LQ5H9U9 1706 aaKnown RBP9.41□□□□□ -0.9
GGA3-222ENST00000621217 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.4□□□□□ -0.9
GGA3-222ENST00000621217 A0A1W2PPM1 405 aa9.4□□□□□ -0.9
GGA3-222ENST00000621217 CLDN5O00501 218 aa9.4□□□□□ -0.9
GGA3-222ENST00000621217 AOC2O75106 756 aa9.4□□□□□ -0.9
GGA3-222ENST00000621217 THP07101 528 aa9.4□□□□□ -0.9
GGA3-222ENST00000621217 MMP3P08254 477 aa9.4□□□□□ -0.9
GGA3-222ENST00000621217 NQO1P15559 274 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms