RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 AKAP14Q86UN6 197 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 CAPSLQ8WWF8 208 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 THUMPD3Q9BV44 507 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 KLHL28Q9NXS3 571 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 TRPM5Q9NZQ8 1165 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 A0A1B0GTH6 734 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 IRGMA1A4Y4 181 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 PID1Q7Z2X4 250 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 PALB2Q86YC2 1186 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 KIF2BQ8N4N8 673 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 ASB2Q96Q27 587 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF624Q9P2J8 865 aaPredicted RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 PHF11Q9UIL8 331 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 ADGRB3O60242 1522 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 ATXN2Q99700 1313 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 FARP2O94887 1054 aaPredicted RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SEMA3DO95025 777 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 FSBPO95073 299 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 APOC1P02654 83 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 C6orf222P0C671 652 aaPredicted RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 ZCCHC18P0CG32 403 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 ACADSBP45954 432 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 NAB2Q15742 525 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 PHKG1Q16816 387 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SNRNP48Q6IEG0 339 aaKnown RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 ABRAXAS1Q6UWZ7 409 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 C3orf62Q6ZUJ4 267 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 DGKHQ86XP1 1220 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 UNC45BQ8IWX7 931 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 FMR1NBQ8N0W7 255 aaPredicted RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 TMIEQ8NEW7 156 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 CLHC1Q8NHS4 586 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SUN5Q8TC36 379 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 BORCS5Q969J3 196 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 C11orf70Q9BRQ4 267 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SLC32A1Q9H598 525 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 STOX2Q9P2F5 926 aaPredicted RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 DYRK3O43781 588 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 RBP1P09455 135 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 PSMB9P28065 219 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 FAUP35544 74 aaKnown RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 STK4Q13043 487 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 EXOC3L1Q86VI1 746 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 IFNEQ86WN2 208 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 LRRC6Q86X45 466 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 JAMLQ86YT9 394 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 EPHX4Q8IUS5 362 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 DHX40Q8IX18 779 aaKnown RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 PDPRQ8NCN5 879 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 CELF1Q92879 486 aaKnown RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 MYLPFQ96A32 169 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 ZIM3Q96PE6 472 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 TMEM237Q96Q45 408 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 CORO1CQ9ULV4 474 aaPredicted RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 FHOD1Q9Y613 1164 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 TTC26A0AVF1 554 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 FAM47E-STBD1D6RA91 191 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 M0QYV0 167 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 AKT1P31749 480 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 HMGCS2P54868 508 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SMCO1Q147U7 214 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 LONRF1Q17RB8 773 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SCARA3Q6AZY7 606 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SNX31Q8N9S9 440 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 TMEM39AQ9NV64 488 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 RRN3Q9NYV6 651 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 ANXA9O76027 345 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 CYBBP04839 570 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 CLTBP09497 229 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 PAICSP22234 425 aaKnown RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 UAP1L1Q3KQV9 507 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 FAM102AQ5T9C2 384 aaPredicted RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 ARMC6Q6NXE6 501 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 ATPAF2Q8N5M1 289 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 USP38Q8NB14 1042 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 HEY2Q9UBP5 337 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SERPIND1P05546 499 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 APRTP07741 180 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 TUFMP49411 452 aaKnown RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 TGM3Q08188 693 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 OR7A2PQ8NGA2 310 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 GORASP1Q9BQQ3 440 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 ADI1Q9BV57 179 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 MRPL4Q9BYD3 311 aaKnown RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 CATSPERBQ9H7T0 1116 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 CCNB1IP1Q9NPC3 277 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 GALNT8Q9NY28 637 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 ADGRL2O95490 1459 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 FAM92AA1XBS5 289 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 OPLAHO14841 1288 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 MGRN1O60291 552 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SNAP91O60641 907 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 LDLRP01130 860 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SP100P23497 879 aaPredicted RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 AP3S2P59780 193 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 NOGQ13253 232 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 DGKKQ5KSL6 1271 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 BTBD10Q9BSF8 475 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 DHX35Q9H5Z1 703 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms