RNA–Protein interactions for RNA: ENST00000619290.4

CYFIP1-210, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-210ENST00000619290 WBP2Q969T9 261 aa13.06□□□□□ -0.32
CYFIP1-210ENST00000619290 XPO6Q96QU8 1125 aaKnown RBP13.06□□□□□ -0.32
CYFIP1-210ENST00000619290 ITM2CQ9NQX7 267 aa13.06□□□□□ -0.32
CYFIP1-210ENST00000619290 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.06□□□□□ -0.32
CYFIP1-210ENST00000619290 GMIPQ9P107 970 aa13.06□□□□□ -0.32
CYFIP1-210ENST00000619290 USP36Q9P275 1121 aaKnown RBP13.06□□□□□ -0.32
CYFIP1-210ENST00000619290 AK5Q9Y6K8 562 aa13.06□□□□□ -0.32
CYFIP1-210ENST00000619290 VWA3AA6NCI4 1184 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 GFRA2O00451 464 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 ARHGAP6O43182 974 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 TBCAO75347 108 aaKnown RBP13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 IRF1P10914 325 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 JUPP14923 745 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 YWHAQP27348 245 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 TPMTP51580 245 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 CACNA2D1P54289 1103 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 STARD3Q14849 445 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 POSTNQ15063 836 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 FUT11Q495W5 492 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 MDH1BQ5I0G3 518 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 HECTD3Q5T447 861 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 DPH6Q7L8W6 267 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 HS2ST1Q7LGA3 356 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 LIMS2Q7Z4I7 341 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 BRSK2Q8IWQ3 736 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 C1orf216Q8TAB5 229 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 MYCBPAPQ8TBZ2 947 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 SAAL1Q96ER3 474 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 BBS2Q9BXC9 721 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 MTMR12Q9C0I1 747 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 MKRN2Q9H000 416 aaKnown RBP13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 CLMPQ9H6B4 373 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 SIX4Q9UIU6 781 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 SNX11Q9Y5W9 270 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 PTPRQQ9UMZ3 2332 aa13.05□□□□□ -0.32
CYFIP1-210ENST00000619290 MUC22E2RYF6 1773 aaPredicted RBP13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 CACNG3O60359 315 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 TYRP14679 529 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 OXTRP30559 389 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 HNF1BP35680 557 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 AFF3P51826 1226 aaKnown RBP13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 CLDN6P56747 220 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 SF3A1Q15459 793 aaKnown RBP13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 TPGS1Q6ZTW0 290 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 CCDC83Q8IWF9 413 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 PDZD8Q8NEN9 1154 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 SNX19Q92543 992 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 BAP1Q92560 729 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 FBXO32Q969P5 355 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 DUSP9Q99956 384 aaKnown RBP13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 TRIM9Q9C026 710 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 TMEM30AQ9NV96 361 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 RBAKQ9NYW8 714 aaPredicted RBP13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 FTSJ1Q9UET6 329 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 CHORDC1Q9UHD1 332 aaPredicted RBP13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 R3HCC1Q9Y3T6 440 aaKnown RBP13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 SLCO1B1Q9Y6L6 691 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 STON1Q9Y6Q2 735 aa13.04□□□□□ -0.32
CYFIP1-210ENST00000619290 PYCARD-AS1I3L0S3 204 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 KCNK3O14649 394 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 TMEM191BP0C7N4 346 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 WARSP23381 471 aaKnown RBP13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 DGKGP49619 791 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 NEK4P51957 841 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 CXADRP78310 365 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 MCM6Q14566 821 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 TAF1BQ53T94 588 aaPredicted RBP13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 TMPRSS6Q8IU80 811 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 NUP93Q8N1F7 819 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 OVCA2Q8WZ82 227 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 SIPA1Q96FS4 1042 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 HPDLQ96IR7 371 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 NACA2Q9H009 215 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 ST6GALNAC4Q9H4F1 302 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 WDR35Q9P2L0 1181 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 DNMT3LQ9UJW3 386 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 ANKRD6Q9Y2G4 727 aa13.03□□□□□ -0.32
CYFIP1-210ENST00000619290 SPTA1P02549 2419 aa13.02□□□□□ -0.32
CYFIP1-210ENST00000619290 ERVH48-1M5A8F1 160 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 PCDHGA12O60330 932 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 RTN3O95197 1032 aaPredicted RBP13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 CISD3P0C7P0 127 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 CCT8P50990 548 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 IL9RQ01113 521 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 TEAD4Q15561 434 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 ZNF720Q7Z2F6 126 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 FAM124AQ86V42 546 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 CACUL1Q86Y37 369 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 FAM184AQ8NB25 1140 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 SNIP1Q8TAD8 396 aaKnown RBP13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 NOC3LQ8WTT2 800 aaKnown RBP13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 PRCCQ92733 491 aaPredicted RBP13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 IGSF8Q969P0 613 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 CALML4Q96GE6 196 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 MMS19Q96T76 1030 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 LLPHQ9BRT6 129 aaKnown RBP13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 NUP58Q9BVL2 599 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 ZNF518BQ9C0D4 1074 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms