RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 TFDP2Q14188 446 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 DMC1Q14565 340 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 CCDC149Q6ZUS6 474 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 ZBTB46Q86UZ6 589 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 NEDD1Q8NHV4 660 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 RETREG1Q9H6L5 497 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 CPSF3Q9UKF6 684 aaKnown RBP3.18□□□□□ -1.9
NEB-220ENST00000618972 IVNS1ABPQ9Y6Y0 642 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 RFX1P22670 979 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 POU1F1P28069 291 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 NCALDP61601 193 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 MSS51Q4VC12 460 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 RNF220Q5VTB9 566 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 TMEM126BQ8IUX1 230 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 UTP4Q969X6 686 aaKnown RBP3.18□□□□□ -1.9
NEB-220ENST00000618972 FAXDC2Q96IV6 333 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 TMEM245Q9H330 911 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 DBNDD1Q9H9R9 158 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 MTMR4Q9NYA4 1195 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 GRHL1Q9NZI5 618 aa3.18□□□□□ -1.9
NEB-220ENST00000618972 PRDM15P57071 1507 aaPredicted RBP3.18□□□□□ -1.9
NEB-220ENST00000618972 ATF2P15336 505 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 NFE2L1Q14494 772 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 ZMYND11Q15326 602 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 ARL13BQ3SXY8 428 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 NUDT8Q8WV74 236 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 SPATA7Q9P0W8 599 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 H3BMM5 538 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 P4HBP07237 508 aaKnown RBP3.17□□□□□ -1.9
NEB-220ENST00000618972 CDK16Q00536 496 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 BSPRYQ5W0U4 402 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 KIAA0408Q6ZU52 694 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 TAS2R42Q7RTR8 314 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 ECHDC2Q86YB7 292 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 ZDHHC13Q8IUH4 622 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 BBS5Q8N3I7 341 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 PITRM1Q5JRX3 1037 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 TRAPPC3LQ5T215 181 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 C16orf62Q7Z3J2 963 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 CAVIN3Q969G5 261 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 L3MBTL3Q96JM7 780 aaPredicted RBP3.17□□□□□ -1.9
NEB-220ENST00000618972 HEY2Q9UBP5 337 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 HEY1Q9Y5J3 304 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 SNX9Q9Y5X1 595 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 WASF2Q9Y6W5 498 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 RGSL1A5PLK6 1076 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 SYN1P17600 705 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 ZNF846Q147U1 533 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 FASTKD3Q14CZ7 662 aaKnown RBP3.17□□□□□ -1.9
NEB-220ENST00000618972 BEND4Q6ZU67 534 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 ZNF554Q86TJ5 538 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 COLGALT2Q8IYK4 626 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 FITM2Q8N6M3 262 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 FAM20AQ96MK3 541 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 GALNT8Q9NY28 637 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 PTPN23Q9H3S7 1636 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 SLC18A1P54219 525 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 NCKAP1LP55160 1127 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 CSTF3Q12996 717 aaKnown RBP3.17□□□□□ -1.9
NEB-220ENST00000618972 SNRNP48Q6IEG0 339 aaKnown RBP3.17□□□□□ -1.9
NEB-220ENST00000618972 CHURC1Q8WUH1 139 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 DLG3Q92796 817 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 NRP1O14786 923 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 GJB1P08034 283 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 FECHP22830 423 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 FASP25445 335 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 KCNT1Q5JUK3 1230 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 DCAF12L1Q5VU92 463 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 CES4AQ5XG92 561 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 NPNTQ6UXI9 565 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 TTLL6Q8N841 843 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 FAM71DQ8N9W8 422 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 BORCS5Q969J3 196 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 PGM2Q96G03 612 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 OSBPL11Q9BXB4 747 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 ADGRA2Q96PE1 1338 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 DLATP10515 647 aaKnown RBP3.17□□□□□ -1.9
NEB-220ENST00000618972 MAPK4P31152 587 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 POLD2P49005 469 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 INHBEP58166 350 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 GRAMD1BQ3KR37 738 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 UGT3A1Q6NUS8 523 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 BRINP3Q76B58 766 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.17□□□□□ -1.9
NEB-220ENST00000618972 OMA1Q96E52 524 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 RNF32Q9H0A6 362 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 VCPKMTQ9H867 229 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 STK39Q9UEW8 545 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 PCDHB4Q9Y5E5 795 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 UGGT1Q9NYU2 1555 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 SGK1O00141 431 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 ATP6V1G1O75348 118 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 GTF2A2P52657 109 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 ITGA8P53708 1063 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 KIZQ2M2Z5 673 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 RIPOR1Q6ZS17 1223 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 RFX7Q2KHR2 1363 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 FAM237BA0A1B0GVD1 139 aa3.17□□□□□ -1.9
NEB-220ENST00000618972 IFRD1O00458 451 aaPredicted RBP3.17□□□□□ -1.9
NEB-220ENST00000618972 GSTT2P0CG29 244 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms