RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ANXA13P27216 316 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 ITPKBP27987 946 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 TNFSF9P41273 254 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 GPR15P49685 360 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 LIG4P49917 911 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 INHBCP55103 352 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 ZNF445P59923 1031 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 ANAPC15P60006 121 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 NR5A1Q13285 461 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 ALCAMQ13740 583 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 POSTNQ15063 836 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 SURF1Q15526 300 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 PROX2Q3B8N5 592 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 PPP1R15BQ5SWA1 713 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 SFMBT2Q5VUG0 894 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 EGFLAMQ63HQ2 1017 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 DIEXFQ68CQ4 756 aaKnown RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 INO80CQ6PI98 192 aaPredicted RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 CLEC14AQ86T13 490 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 FMNL3Q8IVF7 1028 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 KDM1BQ8NB78 822 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 SETD7Q8WTS6 366 aaKnown RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 SCFD1Q8WVM8 642 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 TRPC7Q9HCX4 862 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 DDX19AQ9NUU7 478 aaKnown RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 LRWD1Q9UFC0 647 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 NAP1L2Q9ULW6 460 aaPredicted RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 L1RE1Q9UN81 338 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 ANKRD6Q9Y2G4 727 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 PCNX2A6NKB5 2137 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 BRINP1O60477 761 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 LATS1O95835 1130 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 LDHAP00338 332 aaKnown RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 OSTNP61366 133 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 KDSRQ06136 332 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 STARD3Q14849 445 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 ZC2HC1CQ53FD0 456 aaPredicted RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 COLEC12Q5KU26 742 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 TDRD10Q5VZ19 366 aaKnown RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 DENND5BQ6ZUT9 1274 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 MAEAQ7L5Y9 396 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 CCDC83Q8IWF9 413 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 DIS3L2Q8IYB7 885 aaKnown RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 ADGRF2Q8IZF7 708 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 CPXM2Q8N436 756 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 ZCCHC9Q8N567 271 aaKnown RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 PNPLA1Q8N8W4 532 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 KRI1Q8N9T8 703 aaKnown RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 OR2T3Q8NH03 318 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 MYCBPAPQ8TBZ2 947 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 SAP25Q8TEE9 199 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 WFIKKN2Q8TEU8 576 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 GTF3C6Q969F1 213 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 SKA1Q96BD8 255 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 TOE1Q96GM8 510 aaKnown RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 FIZ1Q96SL8 496 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 CDK5RAP1Q96SZ6 601 aaKnown RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 MSTO1Q9BUK6 570 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 KLF16Q9BXK1 252 aaPredicted RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 IL21RQ9HBE5 538 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 TM9SF3Q9HD45 589 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 DDX43Q9NXZ2 648 aaKnown RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 CFAP97Q9P2B7 532 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 ANKMY1Q9P2S6 941 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 SEL1LQ9UBV2 794 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 USP20Q9Y2K6 914 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 PCDHGA8Q9Y5G5 932 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 PLK4O00444 970 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 HUS1O60921 280 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 GARTP22102 1010 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 PI4KAP42356 2102 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 CCR10P46092 362 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 LSSP48449 732 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 TPMTP51580 245 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 SHBQ15464 509 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 LY6G5CQ5SRR4 150 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 CRELD2Q6UXH1 353 aaPredicted RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 OSTM1Q86WC4 334 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 DHX40Q8IX18 779 aaKnown RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 OR2I1PQ8NGU4 316 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 FAM174AQ8TBP5 190 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 KBTBD7Q8WVZ9 684 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 PIWIL1Q96J94 861 aaKnown RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 SLITRK1Q96PX8 696 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 LLPHQ9BRT6 129 aaKnown RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 MMTAG2Q9BU76 263 aaKnown RBP4.87□□□□□ -1.63
SNCA-213ENST00000618500 PNPLA8Q9NP80 782 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 EVA1BQ9NVM1 165 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 DNMT3LQ9UJW3 386 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 KIAA1024Q9UPX6 916 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 BTBD3Q9Y2F9 522 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 STON1Q9Y6Q2 735 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 SCN8AQ9UQD0 1980 aa4.87□□□□□ -1.63
SNCA-213ENST00000618500 KCNJ18B7U540 433 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 CPA1P15085 419 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 CYP2F1P24903 491 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 EPHA8P29322 1005 aaPredicted RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 RACK1P63244 317 aaKnown RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 RBP5P82980 135 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 GOLGA8FQ08AF8 430 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms