RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 EIF4A3P38919 411 aaKnown RBP11.31□□□□□ -0.6
POLR2A-209ENST00000617998 CAP1Q01518 475 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 SIM2Q14190 667 aaPredicted RBP11.31□□□□□ -0.6
POLR2A-209ENST00000617998 TMEM31Q5JXX7 168 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 VITQ6UXI7 678 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 TRMT2AQ8IZ69 625 aaKnown RBP11.31□□□□□ -0.6
POLR2A-209ENST00000617998 EXD1Q8NHP7 514 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 LENG9Q96B70 501 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 TMEM175Q9BSA9 504 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 TRDMT1O14717 391 aaKnown RBP11.31□□□□□ -0.6
POLR2A-209ENST00000617998 KCNN4O15554 427 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 HMOX2P30519 316 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 GJA8P48165 433 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 XPO4Q9C0E2 1151 aaKnown RBP11.31□□□□□ -0.6
POLR2A-209ENST00000617998 APEX2Q9UBZ4 518 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 TRIM49BA6NDI0 452 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 ZNF839A8K0R7 811 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 EFCAB8A8MWE9 144 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 HP1BP3Q5SSJ5 553 aaPredicted RBP11.31□□□□□ -0.6
POLR2A-209ENST00000617998 TPGS2Q68CL5 300 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 FAAH2Q6GMR7 532 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 STOX1Q6ZVD7 989 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 RRM2BQ7LG56 351 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 MORC4Q8TE76 937 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 CLPBQ9H078 707 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 NXF3Q9H4D5 531 aaKnown RBP11.31□□□□□ -0.6
POLR2A-209ENST00000617998 UBIAD1Q9Y5Z9 338 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 GSAPA4D1B5 854 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 A8MX80 341 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 SUPT3HB4E1H0 165 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 GFAPP14136 432 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 BMPR1AP36894 532 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 PRCPP42785 496 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 RPL6Q02878 288 aaKnown RBP11.31□□□□□ -0.6
POLR2A-209ENST00000617998 ARMC12Q5T9G4 340 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 GKAP1Q5VSY0 366 aaPredicted RBP11.31□□□□□ -0.6
POLR2A-209ENST00000617998 CENPUQ71F23 418 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 RPAINQ86UA6 219 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 KRT35Q92764 455 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 SLC38A3Q99624 504 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 PHPT1Q9NRX4 125 aaPredicted RBP11.31□□□□□ -0.6
POLR2A-209ENST00000617998 PCDHA11Q9Y5I1 949 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 EPN1Q9Y6I3 576 aaPredicted RBP11.31□□□□□ -0.6
POLR2A-209ENST00000617998 GUCY2FP51841 1108 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 RABEPKQ7Z6M1 372 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 NT5DC3Q86UY8 548 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 ECHDC2Q86YB7 292 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 CBWD2Q8IUF1 395 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 OR10G6Q8NH81 332 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 BPIFB1Q8TDL5 484 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 LRRC46Q96FV0 321 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 NT5MQ9NPB1 228 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 SLC27A6Q9Y2P4 619 aa11.31□□□□□ -0.6
POLR2A-209ENST00000617998 CNPP09543 421 aaKnown RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 IQCF3P0C7M6 154 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 PBX3P40426 434 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 GEMP55040 296 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 EIF3EP60228 445 aaKnown RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 TRIM32Q13049 653 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 SMAD1Q15797 465 aaKnown RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 GDAP1L1Q96MZ0 367 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 HAPLN3Q96S86 360 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 PRDM16Q9HAZ2 1276 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 ARHGEF38Q9NXL2 777 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 APOA4P06727 396 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 PURAQ00577 322 aaKnown RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 OCRLQ01968 901 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 ILF3Q12906 894 aaKnown RBP eCLIP11.3□□□□□ -0.64e-11■■□□□ 13.9
POLR2A-209ENST00000617998 CAPRIN1Q14444 709 aaKnown RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 ITPRIPL2Q3MIP1 535 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 TCP11X2Q5H9J9 407 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 CCDC62Q6P9F0 684 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 TBC1D1Q86TI0 1168 aaPredicted RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 ATAD1Q8NBU5 361 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 CALR3Q96L12 384 aaKnown RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 IMPACTQ9P2X3 320 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 COL1A1P02452 1464 aaPredicted RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 F8VP50 259 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 FPGTO14772 594 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 RRP8O43159 456 aaKnown RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 CRTAMO95727 393 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 HNF1BP35680 557 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 PTENP60484 403 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 TMPRSS15P98073 1019 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 SYT10Q6XYQ8 523 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 SLC30A5Q8TAD4 765 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 OTUB1Q96FW1 271 aaPredicted RBP11.3□□□□□ -0.6
POLR2A-209ENST00000617998 HAUS8Q9BT25 410 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 TMEM134Q9H6X4 195 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 GTSE1Q9NYZ3 720 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 A0A1W2PRU2 124 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 CCDC130P13994 396 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 CASP14P31944 242 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 CST9Q5W186 159 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 TEX12Q9BXU0 123 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 INTS13Q9NVM9 706 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 PLK2Q9NYY3 685 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 CD274Q9NZQ7 290 aa11.3□□□□□ -0.6
POLR2A-209ENST00000617998 A0A088AWK7 358 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms