RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 CAV1Q03135 178 aa18.26■□□□□ 0.51
CNOT3-209ENST00000617930 LMNB2Q03252 620 aa18.26■□□□□ 0.51
CNOT3-209ENST00000617930 TNFAIP8L3Q5GJ75 292 aa18.26■□□□□ 0.51
CNOT3-209ENST00000617930 YTHDF3Q7Z739 585 aaKnown RBP18.26■□□□□ 0.51
CNOT3-209ENST00000617930 SNRNP25Q9BV90 132 aaKnown RBP18.26■□□□□ 0.51
CNOT3-209ENST00000617930 TMEM109Q9BVC6 243 aa18.26■□□□□ 0.51
CNOT3-209ENST00000617930 APOC4-APOC2K7ER74 178 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 SGK1O00141 431 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 PQBP1O60828 265 aaKnown RBP18.25■□□□□ 0.51
CNOT3-209ENST00000617930 IFNB1P01574 187 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 APOC2P02655 101 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 CACNA2D1P54289 1103 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 PITX1P78337 314 aaPredicted RBP18.25■□□□□ 0.51
CNOT3-209ENST00000617930 RNASEH2BQ5TBB1 312 aaKnown RBP18.25■□□□□ 0.51
CNOT3-209ENST00000617930 LRRC8DQ7L1W4 858 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 RNF169Q8NCN4 708 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 PGM2Q96G03 612 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 DUSP16Q9BY84 665 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 RSAD1Q9HA92 442 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 PCDH18Q9HCL0 1135 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 GGA2Q9UJY4 613 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 SQORQ9Y6N5 450 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 MYBPHLA2RUH7 354 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 I3L4J1 428 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 TRAPPC3O43617 180 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 RPL22P35268 128 aaKnown RBP18.25■□□□□ 0.51
CNOT3-209ENST00000617930 AUHQ13825 339 aaKnown RBP18.25■□□□□ 0.51
CNOT3-209ENST00000617930 FASTKD3Q14CZ7 662 aaKnown RBP18.25■□□□□ 0.51
CNOT3-209ENST00000617930 UPP1Q16831 310 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 MDH1BQ5I0G3 518 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 OTUD1Q5VV17 481 aaPredicted RBP18.25■□□□□ 0.51
CNOT3-209ENST00000617930 ANKRD22Q5VYY1 191 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 CLEC20AQ6ZU45 233 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 ECHDC2Q86YB7 292 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 ZDHHC17Q8IUH5 632 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 ZCCHC9Q8N567 271 aaKnown RBP18.25■□□□□ 0.51
CNOT3-209ENST00000617930 PLD5Q8N7P1 536 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 PCDH19Q8TAB3 1148 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 LRRN4Q8WUT4 740 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 TNIP3Q96KP6 325 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 HSFY1Q96LI6 401 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 C9orf72Q96LT7 481 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 RNF157Q96PX1 679 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 CNOT10Q9H9A5 744 aaKnown RBP18.25■□□□□ 0.51
CNOT3-209ENST00000617930 PCDH9Q9HC56 1237 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 MTMR10Q9NXD2 777 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 DDX43Q9NXZ2 648 aaKnown RBP18.25■□□□□ 0.51
CNOT3-209ENST00000617930 TPX2Q9ULW0 747 aaKnown RBP18.25■□□□□ 0.51
CNOT3-209ENST00000617930 GIT1Q9Y2X7 761 aa18.25■□□□□ 0.51
CNOT3-209ENST00000617930 FARP1Q9Y4F1 1045 aaPredicted RBP18.25■□□□□ 0.51
CNOT3-209ENST00000617930 TDRD15B5MCY1 1934 aaKnown RBP18.24■□□□□ 0.51
CNOT3-209ENST00000617930 FOXO6A8MYZ6 492 aa18.24■□□□□ 0.51
CNOT3-209ENST00000617930 C9IYK1 514 aa18.24■□□□□ 0.51
CNOT3-209ENST00000617930 XPO1O14980 1071 aaKnown RBP18.24■□□□□ 0.51
CNOT3-209ENST00000617930 POMCP01189 267 aa18.24■□□□□ 0.51
CNOT3-209ENST00000617930 PTPN9P43378 593 aa18.24■□□□□ 0.51
CNOT3-209ENST00000617930 IFT88Q13099 833 aa18.24■□□□□ 0.51
CNOT3-209ENST00000617930 LONRF1Q17RB8 773 aa18.24■□□□□ 0.51
CNOT3-209ENST00000617930 TIGD5Q53EQ6 642 aa18.24■□□□□ 0.51
CNOT3-209ENST00000617930 RELL1Q8IUW5 271 aa18.24■□□□□ 0.51
CNOT3-209ENST00000617930 RTP3Q9BQQ7 232 aa18.24■□□□□ 0.51
CNOT3-209ENST00000617930 TANC1Q9C0D5 1861 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 TCRBV7S3A2A0A539 114 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 F8W810 466 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 FSBPO95073 299 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 SELPP16109 830 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 EIF3EP60228 445 aaKnown RBP18.23■□□□□ 0.51
CNOT3-209ENST00000617930 ADIGQ0VDE8 80 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 PAN2Q504Q3 1202 aaKnown RBP18.23■□□□□ 0.51
CNOT3-209ENST00000617930 BOLA3Q53S33 107 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 HP1BP3Q5SSJ5 553 aaPredicted RBP18.23■□□□□ 0.51
CNOT3-209ENST00000617930 FBXW10Q5XX13 1052 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 CTU1Q7Z7A3 348 aaKnown RBP18.23■□□□□ 0.51
CNOT3-209ENST00000617930 TAB3Q8N5C8 712 aaPredicted RBP18.23■□□□□ 0.51
CNOT3-209ENST00000617930 CCDC185Q8N715 623 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 FAM71DQ8N9W8 422 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 ZMIZ2Q8NF64 920 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 SPATA18Q8TC71 538 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 RBM15Q96T37 977 aaKnown RBP eCLIP18.23■□□□□ 0.512e-6■■□□□ 12.2
CNOT3-209ENST00000617930 TBCBQ99426 244 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 SLC38A7Q9NVC3 462 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 KIAA0100Q14667 2235 aaKnown RBP18.23■□□□□ 0.51
CNOT3-209ENST00000617930 MAP3K6O95382 1288 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 RBP3P10745 1247 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 NPR3P17342 541 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 LBX1P52954 281 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 NOMO1Q15155 1222 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 ANKRD20A8PQ5CZ79 823 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 ICE2Q659A1 982 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 C1orf228Q6PIY5 440 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 SLC39A5Q6ZMH5 540 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 HFE2Q6ZVN8 426 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 ARCQ7LC44 396 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 ZC3H18Q86VM9 953 aaKnown RBP18.23■□□□□ 0.51
CNOT3-209ENST00000617930 CNPY4Q8N129 248 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 TTC13Q8NBP0 860 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 BBOF1Q8ND07 529 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 MDM1Q8TC05 714 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 TEKT4Q8WW24 435 aa18.23■□□□□ 0.51
CNOT3-209ENST00000617930 CPT1BQ92523 772 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms