RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 LIASO43766 372 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 CCNB1P14635 433 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 PPP2R5DQ14738 602 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 MTFR1Q15390 333 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 SURF1Q15526 300 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 CCNG2Q16589 344 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 ZNF484Q5JVG2 852 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 RASIP1Q5U651 963 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 PALM2Q8IXS6 379 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 MS4A4AQ96JQ5 239 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 GBP5Q96PP8 586 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 GORASP1Q9BQQ3 440 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 PCMTD2Q9NV79 361 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 SMAPO00193 183 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 KRT36O76013 467 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 TTC4O95801 387 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 MMP3P08254 477 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 CYP3A5P20815 502 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 YWHAGP61981 247 aaKnown RBP eCLIP15.05■□□□□ -0
SHROOM1-208ENST00000617339 IRX4P78413 519 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 PDCD2Q16342 344 aaPredicted RBP15.05■□□□□ -0
SHROOM1-208ENST00000617339 CA9Q16790 459 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 ZNF792Q3KQV3 632 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 TAF1BQ53T94 588 aaPredicted RBP15.05■□□□□ -0
SHROOM1-208ENST00000617339 SPDYCQ5MJ68 293 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 OLFML2BQ68BL8 750 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 FAM131BQ86XD5 332 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 XYLT1Q86Y38 959 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 CFAP36Q96G28 342 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 ABHD16BQ9H3Z7 469 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 FLRT1Q9NZU1 646 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 CCDC78A2IDD5 438 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 PSTPIP1O43586 416 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 B4GALT4O60513 344 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 F7P08709 466 aaPredicted RBP15.05■□□□□ -0
SHROOM1-208ENST00000617339 SMIM10L2AP0DMW4 78 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 SMIM10L2BP0DMW5 78 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 ETS2P15036 469 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 ELNP15502 786 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 IVDP26440 423 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 CACNA2D1P54289 1103 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 IL9RQ01113 521 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 OVGP1Q12889 678 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 MARCH8Q5T0T0 291 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 ARHGAP22Q7Z5H3 698 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 KATNAL2Q8IYT4 538 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 AGGF1Q8N302 714 aaeCLIP15.05■□□□□ -0
SHROOM1-208ENST00000617339 MAD1L1Q9Y6D9 718 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 USH1CQ9Y6N9 552 aa15.05■□□□□ -0
SHROOM1-208ENST00000617339 CITO14578 2027 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 ATP5DP30049 168 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 PIGHQ14442 188 aaPredicted RBP15.04■□□□□ -0
SHROOM1-208ENST00000617339 HIC1Q14526 733 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 SEPT7Q16181 437 aaKnown RBP15.04■□□□□ -0
SHROOM1-208ENST00000617339 LRRC23Q53EV4 343 aaPredicted RBP15.04■□□□□ -0
SHROOM1-208ENST00000617339 SNX30Q5VWJ9 437 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 SPRYD7Q5W111 196 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 RAET1EQ8TD07 263 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 FAM172AQ8WUF8 416 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 MAIP1Q8WWC4 291 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 SCG3Q8WXD2 468 aaKnown RBP15.04■□□□□ -0
SHROOM1-208ENST00000617339 SNX25Q9H3E2 840 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 NPHS2Q9NP85 383 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 PCDH10Q9P2E7 1040 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 RBBP6Q7Z6E9 1792 aaKnown RBP15.04■□□□□ -0
SHROOM1-208ENST00000617339 hCG_1818297A0A087WSY0 165 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 TP73O15350 636 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 MAGEB2O15479 319 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 CREB3O43889 395 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 ABCD1P33897 745 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 TBC1D25Q3MII6 688 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 PYROXD1Q8WU10 500 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 MAGEB18Q96M61 343 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 UBN1Q9NPG3 1134 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 MYO18AQ92614 2054 aaKnown RBP15.04■□□□□ -0
SHROOM1-208ENST00000617339 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.04■□□□□ -0
SHROOM1-208ENST00000617339 CAPN9O14815 690 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 KCNN4O15554 427 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 CILPO75339 1184 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 EIF4BP23588 611 aaKnown RBP15.04■□□□□ -0
SHROOM1-208ENST00000617339 KDELR1P24390 212 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 RNF43Q68DV7 783 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 DSTYKQ6XUX3 929 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 PGLYRP2Q96PD5 576 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 CCDC77Q9BR77 488 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 SH3BP1Q9Y3L3 701 aa15.04■□□□□ -0
SHROOM1-208ENST00000617339 DOCK1Q14185 1865 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 APRTP07741 180 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 CDKN2BP42772 138 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 AP3M2P53677 418 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 CLUL1Q15846 466 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 CASC4Q6P4E1 433 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 PYROXD2Q8N2H3 581 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 PPTC7Q8NI37 304 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 SLC2A14Q8TDB8 520 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 PEBP4Q96S96 227 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 LRMDAQ9H2I8 198 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 RAB6BQ9NRW1 208 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 A0A1W2PPM1 405 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 ZNF132P52740 706 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms