RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 H2AFVQ71UI9 128 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 SLC26A9Q7LBE3 791 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 NPAS3Q8IXF0 933 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 ARL14EPQ8N8R7 260 aaPredicted RBP16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 CCDC112Q8NEF3 446 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 FGF13Q92913 245 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 ZNF653Q96CK0 615 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 TRIM11Q96F44 468 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 MYADMQ96S97 322 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 PPP1R9BQ96SB3 815 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 CYP2S1Q96SQ9 504 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 EIF3CQ99613 913 aaKnown RBP16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 SELENOOQ9BVL4 669 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 PACSIN1Q9BY11 444 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 ABCC13Q9NSE7 274 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 THEGQ9P2T0 379 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 MYO1AQ9UBC5 1043 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 CNOT8Q9UFF9 292 aaKnown RBP16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 CDH7Q9ULB5 785 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 NAALADL1Q9UQQ1 740 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 TRAV19A0A0A6YYK7 116 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 ANKRD62A6NC57 917 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 CAPN9O14815 690 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 ATMINO43313 823 aaPredicted RBP16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 COCHO43405 550 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 TLR5O60602 858 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 HSF2BPO75031 334 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 FYNP06241 537 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 MYBL1P10243 752 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 NCAM1P13591 858 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 SP100P23497 879 aaPredicted RBP16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 SCNN1AP37088 669 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 MAGEA1P43355 309 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 GSCP56915 257 aaPredicted RBP16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 GPC5P78333 572 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 SMAD2Q15796 467 aaKnown RBP16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 C10orf120Q5SQS8 335 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 DNAJC24Q6P3W2 148 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 RSRC2Q7L4I2 434 aaKnown RBP16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 DEFB106AQ8N104 65 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 C3orf20Q8ND61 904 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 RNF139Q8WU17 664 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 SLC22A12Q96S37 553 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 RNF38Q9H0F5 515 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 THAP2Q9H0W7 228 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 POPDC2Q9HBU9 364 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 METTL5Q9NRN9 209 aaKnown RBP16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 FAM50BQ9Y247 325 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 PCDHA13Q9Y5I0 950 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 NOTCH4Q99466 2003 aa16.35■□□□□ 0.21
PCDHGC3-204ENST00000617222 TCRBV5S1A1TA0A578 114 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 SIGLEC16A6NMB1 481 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 SOBPA7XYQ1 873 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 MDM4O15151 490 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 LCA5LO95447 670 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 OAS1P00973 400 aaKnown RBP16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 KRT3P12035 628 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 IL9P15248 144 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 ATP5C1P36542 298 aaKnown RBP16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 TUBP50607 506 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 CCZ1BP86790 482 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 CCZ1P86791 482 aaPredicted RBP16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 MAMLD1Q13495 774 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 C10orf76Q5T2E6 689 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 SYPL2Q5VXT5 272 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 PLEKHA7Q6IQ23 1121 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 OTOP3Q7RTS5 596 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 TADA2BQ86TJ2 420 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 CMTM8Q8IZV2 173 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 ZNF276Q8N554 614 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 ACRBPQ8NEB7 543 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 ZNF830Q96NB3 372 aaPredicted RBP16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 SLC2A13Q96QE2 648 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 CDK5RAP1Q96SZ6 601 aaKnown RBP16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 TRIM62Q9BVG3 475 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 PHF7Q9BWX1 381 aaPredicted RBP16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 NACA2Q9H009 215 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 PARVAQ9NVD7 372 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 GDE1Q9NZC3 331 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 ZMYM5Q9UJ78 669 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 DNMT3LQ9UJW3 386 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 TMEM59LQ9UK28 342 aa16.34■□□□□ 0.21
PCDHGC3-204ENST00000617222 GREB1Q4ZG55 1949 aa16.33■□□□□ 0.21
PCDHGC3-204ENST00000617222 ARHGAP6O43182 974 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 NRDCO43847 1150 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 DAB1O75553 588 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 IPO7O95373 1038 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 CYP1A2P05177 515 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 MBL2P11226 248 aaPredicted RBP16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 LAMP2P13473 410 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 PFKLP17858 780 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 AVPR1AP37288 418 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 KCNQ1P51787 676 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 EFEMP1Q12805 493 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 AAK1Q2M2I8 961 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 DCAF6Q58WW2 860 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 DCUN1D2Q6PH85 259 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 BEND5Q7L4P6 421 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 ARID3BQ8IVW6 561 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms