RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PGLYRP2Q96PD5 576 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 TARS2Q9BW92 718 aaKnown RBP13.66□□□□□ -0.22
MSH6-214ENST00000616033 FOXP3Q9BZS1 431 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 IMPG2Q9BZV3 1241 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 RBAKQ9NYW8 714 aaPredicted RBP13.66□□□□□ -0.22
MSH6-214ENST00000616033 RPL26L1Q9UNX3 145 aaKnown RBP13.66□□□□□ -0.22
MSH6-214ENST00000616033 LZTS1Q9Y250 596 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 DTNAQ9Y4J8 743 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 COMMD3-BMI1R4GMX3 469 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 A0A088AWK7 358 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 CD1EP15812 388 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 PKNOX1P55347 436 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 MSLNQ13421 630 aaPredicted RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 DPYSL3Q14195 570 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 KRT72Q14CN4 511 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 SWSAP1Q6NVH7 229 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 RAVER1Q8IY67 606 aaKnown RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 CENPOQ9BU64 300 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 SNCAIPQ9Y6H5 919 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 ASTN2O75129 1339 aaPredicted RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 TBC1D12O60347 775 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 ETV4P43268 484 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 RAP1GAPP47736 663 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 SLC44A4Q53GD3 710 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 SH3PXD2AQ5TCZ1 1133 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 WDR75Q8IWA0 830 aaKnown RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 NAT8LQ8N9F0 302 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 LENG1Q96BZ8 264 aaPredicted RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 TAAR1Q96RJ0 339 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 MRPL1Q9BYD6 325 aaKnown RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 XAB2Q9HCS7 855 aaKnown RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 PFDN4Q9NQP4 134 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 KCND2Q9NZV8 630 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 BTAF1O14981 1849 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 A0A1B0GTW7 788 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 TRIM43BA6NCK2 446 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 ONECUT3O60422 494 aaPredicted RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 STAMBPO95630 424 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 CST3P01034 146 aaPredicted RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 SNRPAP09012 282 aaKnown RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 VIL1P09327 827 aaKnown RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 CRABP2P29373 138 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 COPAP53621 1224 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 NCKAP1LP55160 1127 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 CDH6P55285 790 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 GCNT1Q02742 428 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 C6orf52Q5T4I8 152 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 TATDN1Q6P1N9 297 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 PDSS2Q86YH6 399 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 RELL1Q8IUW5 271 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 NLGN1Q8N2Q7 840 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 FAM172AQ8WUF8 416 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 HSPBAP1Q96EW2 488 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 RNPEPQ9H4A4 650 aa13.65□□□□□ -0.22
MSH6-214ENST00000616033 COPS7BQ9H9Q2 264 aaPredicted RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 AGO2Q9UKV8 859 aaKnown RBP13.65□□□□□ -0.22
MSH6-214ENST00000616033 TMEM191CA6NGB0 347 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 MAGEC1O60732 1142 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 TMEM191BP0C7N4 346 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 KRT3P12035 628 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 PSMC1P62191 440 aaKnown RBP13.64□□□□□ -0.23
MSH6-214ENST00000616033 TFAMQ00059 246 aaKnown RBP13.64□□□□□ -0.23
MSH6-214ENST00000616033 TBL3Q12788 808 aaKnown RBP13.64□□□□□ -0.23
MSH6-214ENST00000616033 NRF1Q16656 503 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 TKFCQ3LXA3 575 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 NADK2Q4G0N4 442 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 FASTKD1Q53R41 847 aaKnown RBP13.64□□□□□ -0.23
MSH6-214ENST00000616033 SLC27A3Q5K4L6 730 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 C6orf183Q5T699 404 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 PLEKHA7Q6IQ23 1121 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 CES3Q6UWW8 571 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 ACAD11Q709F0 780 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 ANO5Q75V66 913 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 MZB1Q8WU39 189 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 DEPDC1BQ8WUY9 529 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 COA1Q9GZY4 146 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 KCNK4Q9NYG8 393 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 CNTNAP2Q9UHC6 1331 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 ASLP04424 464 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 FGFR3P22607 806 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 RAP1GDS1P52306 607 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 CHN2P52757 468 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 TTC39BQ5VTQ0 682 aaPredicted RBP13.64□□□□□ -0.23
MSH6-214ENST00000616033 TRIM67Q6ZTA4 783 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 FAM156AQ8NDB6 213 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 CEP41Q9BYV8 373 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 CSH1P0DML2 217 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 CSH2P0DML3 217 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 GRIA1P42261 906 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 TSPY1Q01534 308 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 CRY2Q49AN0 593 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 PCGF5Q86SE9 256 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 SLC26A11Q86WA9 606 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 PHTF2Q8N3S3 785 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 ZSCAN18Q8TBC5 510 aaPredicted RBP13.64□□□□□ -0.23
MSH6-214ENST00000616033 SLC44A1Q8WWI5 657 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 DTNBP1Q96EV8 351 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 MARK4Q96L34 752 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 MSTO1Q9BUK6 570 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 SEMA6AQ9H2E6 1030 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms