RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 CYTH4Q9UIA0 394 aa17.57■□□□□ 0.4
CBWD3-211ENST00000615061 YJEFN3A6XGL0 299 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 E7ENQ6 273 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 EPHB6O15197 1021 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 YWHAGP61981 247 aaKnown RBP eCLIP17.56■□□□□ 0.4
CBWD3-211ENST00000615061 TCF15Q12870 199 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 PON2Q15165 354 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 SLC47A2Q86VL8 602 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 RALGPS2Q86X27 583 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-211ENST00000615061 MIB1Q86YT6 1006 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 DTWD2Q8NBA8 298 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 KLF16Q9BXK1 252 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-211ENST00000615061 GANQ9H2C0 597 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 FAM207AQ9NSI2 230 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-211ENST00000615061 CLIC5Q9NZA1 410 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 PIEZO1Q92508 2521 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 LRRC10BA6NIK2 292 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 LGALS16A8MUM7 142 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 TPM2P07951 284 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 PTMSP20962 102 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 GJA4P35212 333 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 PSEN1P49768 467 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 MLLT6P55198 1093 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-211ENST00000615061 IQCB1Q15051 598 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 FKBP15Q5T1M5 1219 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 PASD1Q8IV76 773 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 FAM71AQ8IYT1 594 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 ANKRD20A12PQ8NF67 263 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 ATP2A3Q93084 1043 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 ST7Q9NRC1 585 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 RBM12Q9NTZ6 932 aaKnown RBP17.56■□□□□ 0.4
CBWD3-211ENST00000615061 DNMT3LQ9UJW3 386 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 SIK3Q9Y2K2 1263 aa17.56■□□□□ 0.4
CBWD3-211ENST00000615061 MRPS17Q9Y2R5 130 aaKnown RBP17.56■□□□□ 0.4
CBWD3-211ENST00000615061 MED7O43513 233 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 GALR2O43603 387 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-211ENST00000615061 GREM1O60565 184 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 RALAP11233 206 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 DAOAP59103 153 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 EFEMP1Q12805 493 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 SYCP1Q15431 976 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 ZSCAN23Q3MJ62 389 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 DDX42Q86XP3 938 aaKnown RBP eCLIP17.55■□□□□ 0.4
CBWD3-211ENST00000615061 BBS7Q8IWZ6 715 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 ADGRG2Q8IZP9 1017 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 CPA6Q8N4T0 437 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 EDEM1Q92611 657 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 HSFY1Q96LI6 401 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 NELL2Q99435 816 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 OSBPL6Q9BZF3 934 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 MIS12Q9H081 205 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 FBRSL1Q9HCM7 1045 aaKnown RBP17.55■□□□□ 0.4
CBWD3-211ENST00000615061 PLCB1Q9NQ66 1216 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 CNGB3Q9NQW8 809 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 TJP2Q9UDY2 1190 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 RASAL2Q9UJF2 1139 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 SH3BP1Q9Y3L3 701 aa17.55■□□□□ 0.4
CBWD3-211ENST00000615061 MYO18AQ92614 2054 aaKnown RBP17.54■□□□□ 0.4
CBWD3-211ENST00000615061 ZFHX2Q9C0A1 2572 aaPredicted RBP17.54■□□□□ 0.4
CBWD3-211ENST00000615061 H0Y858 1186 aa17.54■□□□□ 0.4
CBWD3-211ENST00000615061 UBXN1Q04323 297 aa17.54■□□□□ 0.4
CBWD3-211ENST00000615061 PTK2Q05397 1052 aa17.54■□□□□ 0.4
CBWD3-211ENST00000615061 BSPRYQ5W0U4 402 aa17.54■□□□□ 0.4
CBWD3-211ENST00000615061 KLHDC10Q6PID8 442 aa17.54■□□□□ 0.4
CBWD3-211ENST00000615061 SCUBE3Q8IX30 993 aa17.54■□□□□ 0.4
CBWD3-211ENST00000615061 WDTC1Q8N5D0 677 aa17.54■□□□□ 0.4
CBWD3-211ENST00000615061 CLDN23Q96B33 292 aa17.54■□□□□ 0.4
CBWD3-211ENST00000615061 LMAN1LQ9HAT1 526 aa17.54■□□□□ 0.4
CBWD3-211ENST00000615061 FRYLO94915 3013 aa17.54■□□□□ 0.4
CBWD3-211ENST00000615061 E2F8A0AVK6 867 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 FAM170AA1A519 330 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 F8VZ95 297 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 CYP17A1P05093 508 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 HMBSP08397 361 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 CHRNB1P11230 501 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 POLR2FP61218 127 aaKnown RBP17.53■□□□□ 0.4
CBWD3-211ENST00000615061 GAB4Q2WGN9 574 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 BTBD8Q5XKL5 378 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 RSRC2Q7L4I2 434 aaKnown RBP17.53■□□□□ 0.4
CBWD3-211ENST00000615061 ARHGAP18Q8N392 663 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 ZNF276Q8N554 614 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 MSANTD3Q96H12 275 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 STK33Q9BYT3 514 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 CBX8Q9HC52 389 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 NLRC4Q9NPP4 1024 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 RIF1Q5UIP0 2472 aaKnown RBP17.53■□□□□ 0.4
CBWD3-211ENST00000615061 SMTNL1A8MU46 457 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 E5RJQ4 531 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 TEX33O43247 280 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 NFATC1O95644 943 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 RPL34P49207 117 aaKnown RBP17.53■□□□□ 0.4
CBWD3-211ENST00000615061 DHCR24Q15392 516 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 RHBDF2Q6PJF5 856 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 LUZP1Q86V48 1076 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 SLC4A5Q9BY07 1137 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 PCDHGC3Q9UN70 934 aa17.53■□□□□ 0.4
CBWD3-211ENST00000615061 SLC9A3R1O14745 358 aaPredicted RBP17.52■□□□□ 0.4
CBWD3-211ENST00000615061 STC2O76061 302 aa17.52■□□□□ 0.4
CBWD3-211ENST00000615061 GALK1P51570 392 aa17.52■□□□□ 0.4
CBWD3-211ENST00000615061 PDCLQ13371 301 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms