RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 GPD2P43304 727 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 SATB1Q01826 763 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 RUNX3Q13761 415 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 ANGPT1Q15389 498 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 LY6G5CQ5SRR4 150 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 BMP8AQ7Z5Y6 402 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 ALYREFQ86V81 257 aaKnown RBP6□□□□□ -1.45
CPNE3-208ENST00000614678 DCLK2Q8N568 766 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 CELF5Q8N6W0 485 aaKnown RBP6□□□□□ -1.45
CPNE3-208ENST00000614678 ANKRD52Q8NB46 1076 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 ACOX2Q99424 681 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 ECT2Q9H8V3 914 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 ANLNQ9NQW6 1124 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 USP3Q9Y6I4 520 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 CFAP47Q6ZTR5 3102 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 SYNJ2BP-COX16A0A087WUM0 186 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 TRAV19A0A0A6YYK7 116 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 I6L893 689 aaPredicted RBP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 ZNF18P17022 549 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 OPRD1P41143 372 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 WASP42768 502 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 KDSRQ06136 332 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 SMARCB1Q12824 385 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 DRAP1Q14919 205 aaPredicted RBP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 MAPRE1Q15691 268 aaKnown RBP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 ARHGAP15Q53QZ3 475 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 SGO2Q562F6 1265 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 C2orf27AQ580R0 203 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 RAB41Q5JT25 222 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 C10orf120Q5SQS8 335 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 TRNP1Q6NT89 227 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 C1orf131Q8NDD1 294 aaKnown RBP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 SORCS1Q8WY21 1168 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 SLC6A17Q9H1V8 727 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 COX16Q9P0S2 106 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 APEX2Q9UBZ4 518 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 LOC400499M0QZD8 3231 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 CHADO15335 359 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 PAPSS1O43252 624 aaPredicted RBP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 THAP12O43422 761 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 ERCC5P28715 1186 aaPredicted RBP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 USP4Q13107 963 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 IQCB1Q15051 598 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 MAN2A1Q16706 1144 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 FAM182AQ5T1J6 154 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 RFWD3Q6PCD5 774 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 SASS6Q6UVJ0 657 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 ASCL5Q7RTU5 278 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 NOP9Q86U38 636 aaKnown RBP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 YAF2Q8IY57 180 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 ENOX1Q8TC92 643 aaKnown RBP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 WFDC5Q8TCV5 224 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 SLITRK1Q96PX8 696 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 GCNAQ96QF7 691 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 THAP9Q9H5L6 903 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 RASAL2Q9UJF2 1139 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 SNX10Q9Y5X0 201 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 CNOT1A5YKK6 2376 aaKnown RBP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 DCLK1O15075 740 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 AP5Z1O43299 807 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 TSPAN3O60637 253 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 RNF40O75150 1001 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 ERBB2P04626 1255 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 MMEP08473 750 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 GNA15P30679 374 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 POLR2FP61218 127 aaKnown RBP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 CCINQ13939 588 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 SYCP1Q15431 976 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 CCDC6Q16204 474 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 HECTD3Q5T447 861 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 KLHDC7AQ5VTJ3 777 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 MMS22LQ6ZRQ5 1243 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 RTL10Q7L3V2 364 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 CCDC33Q8N5R6 958 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 DTWD2Q8NBA8 298 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 RNF214Q8ND24 703 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 SLC30A5Q8TAD4 765 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 OLIG1Q8TAK6 271 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 IRF7Q92985 503 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 NAA15Q9BXJ9 866 aaKnown RBP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 KLF16Q9BXK1 252 aaPredicted RBP5.99□□□□□ -1.45
CPNE3-208ENST00000614678 GANQ9H2C0 597 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 MAFFQ9ULX9 164 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 SIK3Q9Y2K2 1263 aa5.99□□□□□ -1.45
CPNE3-208ENST00000614678 STC2O76061 302 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 GFPT2O94808 682 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 UCHL3P15374 230 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 RFX1P22670 979 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 PAX3P23760 479 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 IRAK1P51617 712 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 COPB1P53618 953 aaKnown RBP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 YWHAGP61981 247 aaKnown RBP eCLIP5.98□□□□□ -1.45
CPNE3-208ENST00000614678 DHCR24Q15392 516 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 ZSCAN23Q3MJ62 389 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 BSPRYQ5W0U4 402 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 ARHGAP17Q68EM7 881 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 LCLAT1Q6UWP7 414 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 GBP6Q6ZN66 633 aa5.98□□□□□ -1.45
CPNE3-208ENST00000614678 DENND1CQ8IV53 801 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms