RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 PKN2Q16513 984 aaKnown RBP11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TXNRD3NBQ6F5E7 133 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 DPY19L2Q6NUT2 758 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ARHGEF18Q6ZSZ5 1173 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CENPUQ71F23 418 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 EEPD1Q7L9B9 569 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CEP120Q8N960 986 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 JOSD2Q8TAC2 188 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TRAPPC12Q8WVT3 735 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CLPTM1LQ96KA5 538 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 FHDC1Q9C0D6 1143 aaPredicted RBP11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 VCXQ9H320 206 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PNPLA8Q9NP80 782 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CNTN3Q9P232 1028 aa11.3□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 A0A087WZ62 844 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GYG2O15488 501 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ITGB3P05106 788 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ADORA2AP29274 412 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CACNA2D1P54289 1103 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 BTKQ06187 659 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 THOC5Q13769 683 aaKnown RBP11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 WDR78Q5VTH9 848 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TRABD2AQ86V40 505 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PPFIBP2Q8ND30 876 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CENPIQ92674 756 aaPredicted RBP11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TWNKQ96RR1 684 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 FDXACB1Q9BRP7 624 aaPredicted RBP11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SMYD3Q9H7B4 428 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 DPP3Q9NY33 737 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SMG5Q9UPR3 1016 aaKnown RBP11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 A0A1W2PPM1 405 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MDM4O15151 490 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GPR32O75388 356 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MMP3P08254 477 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 HARSP12081 509 aaKnown RBP11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 KRT10P13645 584 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SP100P23497 879 aaPredicted RBP11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ATXN3P54252 364 aaPredicted RBP11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 LRRC23Q53EV4 343 aaPredicted RBP11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CGB2Q6NT52 195 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 DLK2Q6UY11 383 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TTC17Q96AE7 1141 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 EPAS1Q99814 870 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ARHGEF3Q9NR81 526 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.29□□□□□ -0.63e-51■□□□□ 10
SENP3-EIF4A1-201ENST00000614237 LNPEPQ9UIQ6 1025 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ZNF148Q9UQR1 794 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SMIM35A0A1B0GVV1 85 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TPBGLP0DKB5 382 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CYP3A5P20815 502 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TGM2P21980 687 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ADAM17P78536 824 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 FASTKD3Q14CZ7 662 aaKnown RBP11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GALNTL6Q49A17 601 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 BOLA3Q53S33 107 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SNX27Q96L92 541 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PHF12Q96QT6 1004 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 NT5C1AQ9BXI3 368 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ABHD16BQ9H3Z7 469 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PACSIN3Q9UKS6 424 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 Q9Y3F1 56 aa11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.29□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 H3BRB1 525 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ZNF189O75820 626 aaPredicted RBP11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GPD1P21695 349 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 HOXC8P31273 242 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RPA3P35244 121 aaPredicted RBP11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CCNFP41002 786 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 NOMO1Q15155 1222 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CYP4A22Q5TCH4 519 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MAP1SQ66K74 1059 aaPredicted RBP11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 OLFML2BQ68BL8 750 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SLC9A4Q6AI14 798 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TTC7BQ86TV6 843 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SLC35F5Q8WV83 523 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 APBB2Q92870 758 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 NMD3Q96D46 503 aaKnown RBP11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 OCEL1Q9H607 264 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TUT1Q9H6E5 874 aaKnown RBP11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GDAP2Q9NXN4 497 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 USP18Q9UMW8 372 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SLC15A5A6NIM6 579 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 A6NJR5 290 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SPAG6O75602 509 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GJB1P08034 283 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GSTA2P09210 222 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TAC1P20366 129 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MIPP30301 263 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 HOXA11P31270 313 aaPredicted RBP11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PTPN9P43378 593 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 NEK3P51956 506 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 WDR4P57081 412 aaKnown RBP11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TFDP2Q14188 446 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GRIK4Q16099 956 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 C9orf131Q5VYM1 1079 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ADGRD1Q6QNK2 874 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CRYBG2Q8N1P7 616 aa11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GBP7Q8N8V2 638 aaPredicted RBP11.28□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GLIS1Q8NBF1 620 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms