RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 RARGP13631 454 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 TAF5Q15542 800 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 ARHGAP15Q53QZ3 475 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 PPP1R15BQ5SWA1 713 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 HFE2Q6ZVN8 426 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 SLC35G2Q8TBE7 412 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 RNF139Q8WU17 664 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 RFFLQ8WZ73 363 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 ARHGEF26Q96DR7 871 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 NUP85Q9BW27 656 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 TSGA10Q9BZW7 698 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 OLA1Q9NTK5 396 aaKnown RBP15.39■□□□□ 0.05
CD48-203ENST00000613788 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.39■□□□□ 0.05
CD48-203ENST00000613788 PPP2R2CQ9Y2T4 447 aa15.39■□□□□ 0.05
CD48-203ENST00000613788 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.38■□□□□ 0.05
CD48-203ENST00000613788 A0A1W2PRU2 124 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 TMEM191CA6NGB0 347 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 SOBPA7XYQ1 873 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 BTNL10A8MVZ5 291 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 KRT86O43790 486 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 DAB1O75553 588 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 DESP17661 470 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 DDX6P26196 483 aaKnown RBP eCLIP15.38■□□□□ 0.05
CD48-203ENST00000613788 NOS2P35228 1153 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 RFC1P35251 1148 aaPredicted RBP15.38■□□□□ 0.05
CD48-203ENST00000613788 MATKP42679 507 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 MTHFRP42898 656 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 TUBP50607 506 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 NTHL1P78549 312 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 TCEAL1Q15170 157 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 DCAF6Q58WW2 860 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 HECTD3Q5T447 861 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 ZNF662Q6ZS27 426 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 RSRC2Q7L4I2 434 aaKnown RBP15.38■□□□□ 0.05
CD48-203ENST00000613788 TMEM150AQ86TG1 271 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 DEFB106AQ8N104 65 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 CALR3Q96L12 384 aaKnown RBP15.38■□□□□ 0.05
CD48-203ENST00000613788 MCEEQ96PE7 176 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 SLC2A13Q96QE2 648 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 UBE2ZQ9H832 354 aaPredicted RBP15.38■□□□□ 0.05
CD48-203ENST00000613788 WDR6Q9NNW5 1121 aaKnown RBP15.38■□□□□ 0.05
CD48-203ENST00000613788 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.38■□□□□ 0.05
CD48-203ENST00000613788 RRN3Q9NYV6 651 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 LCMT1Q9UIC8 334 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 CD207Q9UJ71 328 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 ZMYM5Q9UJ78 669 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 MRPS23Q9Y3D9 190 aaKnown RBP15.38■□□□□ 0.05
CD48-203ENST00000613788 RCCD1A6NED2 376 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 CCP110O43303 1012 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 TLR5O60602 858 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 TADA3O75528 432 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 FYNP06241 537 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 PDGFRAP16234 1089 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 PFKLP17858 780 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 NOP2P46087 812 aaKnown RBP15.38■□□□□ 0.05
CD48-203ENST00000613788 PGFP49763 221 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 RPL7AP62424 266 aaKnown RBP15.38■□□□□ 0.05
CD48-203ENST00000613788 PRSS36Q5K4E3 855 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 JOSD2Q8TAC2 188 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 ZNF564Q8TBZ8 553 aaPredicted RBP15.38■□□□□ 0.05
CD48-203ENST00000613788 EDEM1Q92611 657 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 HLA-CQ95604 372 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 DDX23Q9BUQ8 820 aaKnown RBP15.38■□□□□ 0.05
CD48-203ENST00000613788 LACRTQ9GZZ8 138 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 OSER1Q9NX31 292 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 STAP1Q9ULZ2 295 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 TFR2Q9UP52 801 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 NAALADL1Q9UQQ1 740 aa15.38■□□□□ 0.05
CD48-203ENST00000613788 CLUHO75153 1309 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 C2CD4BA6NLJ0 364 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 MYO1FO00160 1098 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 MTA2O94776 668 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 GJB6O95452 261 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 GPD1P21695 349 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 FSHRP23945 695 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 SDC4P31431 198 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 ATP5C1P36542 298 aaKnown RBP15.37■□□□□ 0.05
CD48-203ENST00000613788 FLT3P36888 993 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 CCR2P41597 374 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 NAP1L1P55209 391 aaKnown RBP15.37■□□□□ 0.05
CD48-203ENST00000613788 IFI16Q16666 785 aaKnown RBP15.37■□□□□ 0.05
CD48-203ENST00000613788 C10orf120Q5SQS8 335 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 KLHDC10Q6PID8 442 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 EMC1Q8N766 993 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 SMRP1Q8NCR6 262 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 SHKBP1Q8TBC3 707 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 FNIP1Q8TF40 1166 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 RXFP2Q8WXD0 754 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 TCEAL4Q96EI5 215 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 NECTIN4Q96NY8 510 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 NACA2Q9H009 215 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 TMEM51Q9NW97 253 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 ANAPC7Q9UJX3 599 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 PYCARDQ9ULZ3 195 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 COG5Q9UP83 839 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 GREB1Q4ZG55 1949 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 SZT2Q5T011 3432 aa15.37■□□□□ 0.05
CD48-203ENST00000613788 OAS1P00973 400 aaKnown RBP15.36■□□□□ 0.05
CD48-203ENST00000613788 GJA1P17302 382 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 HDCP19113 662 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms