RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 KRT6CP48668 564 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 VAMP7P51809 220 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 JAK3P52333 1124 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 AP3M2P53677 418 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 DRG2P55039 364 aaKnown RBP6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 NCKAP1LP55160 1127 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 RTP1P59025 263 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 PSMC5P62195 406 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 GUCY2DQ02846 1103 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 PPP3CAQ08209 521 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 CYTH1Q15438 398 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 MAPRE1Q15691 268 aaKnown RBP6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 HIF1AQ16665 826 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 MYLK3Q32MK0 819 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 LIN52Q52LA3 116 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 EAPPQ56P03 285 aaPredicted RBP6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 SNX30Q5VWJ9 437 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 CORO6Q6QEF8 472 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 Q6ZNX1 250 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 PEX26Q7Z412 305 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 HAUS6Q7Z4H7 955 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 NLRP8Q86W28 1048 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 SPATA24Q86W54 205 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 KSR1Q8IVT5 923 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 NIM1KQ8IY84 436 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 HACE1Q8IYU2 909 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 XXYLT1Q8NBI6 393 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 RBBP8NLQ8NC74 664 aaPredicted RBP6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 SLC35G2Q8TBE7 412 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 U2AF1L4Q8WU68 220 aaKnown RBP6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 CASKIN2Q8WXE0 1202 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 FAM136AQ96C01 138 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 SUSD3Q96L08 255 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 FBXL18Q96ME1 805 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 TAAR1Q96RJ0 339 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 KRT12Q99456 494 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 AGPAT1Q99943 283 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 PDCD2LQ9BRP1 358 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 SHCBP1LQ9BZQ2 653 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 TAF1DQ9H5J8 278 aaPredicted RBP6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 MYOZ2Q9NPC6 264 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 PDLIM7Q9NR12 457 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 DDX56Q9NY93 547 aaKnown RBP6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 HMGXB4Q9UGU5 601 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 AMFRQ9UKV5 643 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 PCDHB4Q9Y5E5 795 aa6.96□□□□□ -1.29
CDKAL1-204ENST00000613575 ANKRD34BA5PLL1 514 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 GOLGA8IPA6NC78 632 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 E9PBE3 544 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 PGRMC1O00264 195 aaKnown RBP6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 ATP2A1O14983 1001 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 YKT6O15498 198 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 DDX3YO15523 660 aaKnown RBP6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 RAD51CO43502 376 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 TMCC2O75069 709 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 ATP2C2O75185 946 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 STBD1O95210 358 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 VAV1P15498 845 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 M6PRP20645 277 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 ECHS1P30084 290 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 YWHABP31946 246 aaKnown RBP6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 GTF2H1P32780 548 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 PCYT1AP49585 367 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 OAZ1P54368 228 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 MAP3K7CLP57077 242 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 SNX16P57768 344 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 RPS6P62753 249 aaKnown RBP6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 PPP2R2AP63151 447 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 KRT76Q01546 638 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 GUCY1A3Q02108 690 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 GBE1Q04446 702 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 RUNX1T1Q06455 604 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 SPP2Q13103 211 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 DNAJC3Q13217 504 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 SP140Q13342 867 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 MTMR1Q13613 665 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 TNFAIP1Q13829 316 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 GNA13Q14344 377 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 PGM5Q15124 567 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 GPR162Q16538 588 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 TTMPQ5BVD1 217 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 CIAPIN1Q6FI81 312 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 FIGNL1Q6PIW4 674 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 LRIG3Q6UXM1 1119 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 LONP2Q86WA8 852 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 DDX42Q86XP3 938 aaKnown RBP eCLIP6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 GLYCTKQ8IVS8 523 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 GSPT2Q8IYD1 628 aaKnown RBP6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 FAM71AQ8IYT1 594 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 NUP93Q8N1F7 819 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 BBS5Q8N3I7 341 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 FLCNQ8NFG4 579 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 IL31RAQ8NI17 732 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 CALML6Q8TD86 181 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 GTF3C2Q8WUA4 911 aaPredicted RBP6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 NAT14Q8WUY8 206 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 PGBD4Q96DM1 585 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 KLRG1Q96E93 195 aa6.96□□□□□ -1.3
CDKAL1-204ENST00000613575 MFSD14AQ96MC6 490 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms